Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G285800.1 | Wheat | cytosol, mitochondrion | 89.05 | 88.41 |
| TraesCS3A01G286000.1 | Wheat | cytosol, mitochondrion | 88.32 | 87.68 |
| TraesCS3B01G320300.1 | Wheat | cytosol, mitochondrion | 87.59 | 86.96 |
| Os01t0723200-01 | Rice | nucleus | 82.48 | 81.88 |
| Zm00001d011741_P001 | Maize | plastid | 81.02 | 81.02 |
| EES03542 | Sorghum | mitochondrion | 81.02 | 81.02 |
| Zm00001d043606_P001 | Maize | mitochondrion | 81.02 | 81.02 |
| CDX80683 | Canola | mitochondrion | 74.45 | 76.69 |
| AT3G04920.1 | Thale cress | mitochondrion | 74.45 | 76.69 |
| Bra009989.1-P | Field mustard | mitochondrion | 74.45 | 76.69 |
| Bra036117.1-P | Field mustard | mitochondrion | 74.45 | 76.69 |
| Bra040115.1-P | Field mustard | mitochondrion | 74.45 | 76.69 |
| Bra040415.1-P | Field mustard | mitochondrion | 74.45 | 76.69 |
| CDY59816 | Canola | mitochondrion | 74.45 | 76.69 |
| CDY52499 | Canola | mitochondrion | 74.45 | 76.69 |
| CDY05587 | Canola | mitochondrion | 74.45 | 76.69 |
| CDX86189 | Canola | mitochondrion | 74.45 | 76.69 |
| CDY00010 | Canola | extracellular | 74.45 | 76.69 |
| CDY50766 | Canola | mitochondrion | 74.45 | 76.69 |
| CDY21104 | Canola | mitochondrion | 74.45 | 76.69 |
| CDY30024 | Canola | mitochondrion | 74.45 | 76.69 |
| CDY41909 | Canola | mitochondrion | 74.45 | 76.69 |
| VIT_14s0030g01620.t01 | Wine grape | mitochondrion | 74.45 | 74.45 |
| KRH68706 | Soybean | endoplasmic reticulum | 74.45 | 74.45 |
| Solyc09g065330.2.1 | Tomato | nucleus | 72.26 | 74.44 |
| Solyc06g084230.2.1 | Tomato | endoplasmic reticulum, unclear | 72.26 | 74.44 |
| Solyc01g097870.2.1 | Tomato | mitochondrion | 72.26 | 74.44 |
| PGSC0003DMT400051640 | Potato | extracellular | 72.26 | 74.44 |
| PGSC0003DMT400049836 | Potato | mitochondrion | 72.26 | 74.44 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 67.15 | 74.19 |
| VIT_07s0151g00900.t01 | Wine grape | mitochondrion | 73.72 | 73.72 |
| KRG96941 | Soybean | nucleus | 73.72 | 73.72 |
| GSMUA_Achr6P05510_001 | Banana | mitochondrion | 73.72 | 73.19 |
| GSMUA_Achr9P28760_001 | Banana | mitochondrion | 73.72 | 73.19 |
| KRH34063 | Soybean | mitochondrion | 72.99 | 72.99 |
| AT5G28060.1 | Thale cress | mitochondrion | 70.8 | 72.93 |
| GSMUA_Achr4P30950_001 | Banana | mitochondrion | 65.69 | 72.58 |
| GSMUA_Achr2P15660_001 | Banana | mitochondrion | 72.99 | 72.46 |
| CDX74161 | Canola | mitochondrion | 48.91 | 69.07 |
| HORVU1Hr1G044880.1 | Barley | mitochondrion, plastid | 53.28 | 68.87 |
| KRG92744 | Soybean | mitochondrion | 68.61 | 68.12 |
| KRH04214 | Soybean | cytosol | 46.72 | 65.98 |
| HORVU7Hr1G088580.1 | Barley | mitochondrion, plastid | 81.02 | 65.29 |
| KRH04217 | Soybean | mitochondrion | 35.04 | 63.16 |
| HORVU6Hr1G044840.1 | Barley | plasma membrane | 81.02 | 62.36 |
| HORVU2Hr1G055560.3 | Barley | cytosol, mitochondrion | 54.01 | 52.86 |
| KRH64028 | Soybean | mitochondrion | 49.63 | 49.28 |
| GSMUA_Achr8P20160_001 | Banana | mitochondrion | 50.37 | 34.85 |
Protein Annotations
| MapMan:17.1.3.1.25 | Gene3D:3.30.70.3370 | UniProt:A0A287LHN3 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU3Hr1G068610 |
| EnsemblPlants:HORVU3Hr1G068610.1 | HAMAP:MF_00545 | PFAM:PD006052 | PFAM:PF01282 | ScanProsite:PS00529 | PANTHER:PTHR10496 |
| PANTHER:PTHR10496:SF9 | InterPro:Ribosomal_L23/L15e_core_dom_sf | InterPro:Ribosomal_S24e | InterPro:Ribosomal_S24e_CS | SUPFAM:SSF54189 | UniParc:UPI000B46CCA2 |
| SEG:seg | : | : | : | : | : |
Description
40S ribosomal protein S24 [Source:UniProtKB/TrEMBL;Acc:A0A287LHN3]
Coordinates
chrchr3H:+:519962184..519964588
Molecular Weight (calculated)
15789.7 Da
IEP (calculated)
11.608
GRAVY (calculated)
-0.848
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MAETRPSAVT LRTRKFMTNR LLSRKQFVLE VIHPGQANVP KVRRKDKLAK MYDVKEPNCI VVFKFRTHFG GGKSTGFGLI YDNLDAAKKF EPKYRLIRNG
101: LATKVEKSRK QIKERKNRSK KIRGVKKAKA DAGKKKK
101: LATKVEKSRK QIKERKNRSK KIRGVKKAKA DAGKKKK
001: MAEKAVTIRT RKFMTNRLLS RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFVF KFRTHFGGGK SSGFGLIYDT VESAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDA KKK
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDA KKK
Arabidopsis Description
RPS24A40S ribosomal protein S24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS17]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.