Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G04920.1 | Thale cress | mitochondrion | 94.74 | 94.74 |
| Bra009989.1-P | Field mustard | mitochondrion | 93.98 | 93.98 |
| Bra036117.1-P | Field mustard | mitochondrion | 93.98 | 93.98 |
| CDX80683 | Canola | mitochondrion | 93.98 | 93.98 |
| CDX86189 | Canola | mitochondrion | 93.98 | 93.98 |
| CDY00010 | Canola | extracellular | 93.98 | 93.98 |
| CDY59816 | Canola | mitochondrion | 93.98 | 93.98 |
| CDY05587 | Canola | mitochondrion | 93.23 | 93.23 |
| CDY52499 | Canola | mitochondrion | 93.23 | 93.23 |
| Solyc06g084230.2.1 | Tomato | endoplasmic reticulum, unclear | 90.98 | 90.98 |
| Solyc09g065330.2.1 | Tomato | nucleus | 90.23 | 90.23 |
| Solyc01g097870.2.1 | Tomato | mitochondrion | 90.23 | 90.23 |
| PGSC0003DMT400051640 | Potato | extracellular | 90.23 | 90.23 |
| PGSC0003DMT400049836 | Potato | mitochondrion | 90.23 | 90.23 |
| KRG96941 | Soybean | nucleus | 87.97 | 85.4 |
| KRH68706 | Soybean | endoplasmic reticulum | 86.47 | 83.94 |
| VIT_14s0030g01620.t01 | Wine grape | mitochondrion | 84.96 | 82.48 |
| KRH34063 | Soybean | mitochondrion | 84.96 | 82.48 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 76.69 | 82.26 |
| GSMUA_Achr4P30950_001 | Banana | mitochondrion | 75.94 | 81.45 |
| GSMUA_Achr9P28760_001 | Banana | mitochondrion | 84.21 | 81.16 |
| GSMUA_Achr6P05510_001 | Banana | mitochondrion | 84.21 | 81.16 |
| VIT_07s0151g00900.t01 | Wine grape | mitochondrion | 83.46 | 81.02 |
| GSMUA_Achr2P15660_001 | Banana | mitochondrion | 83.46 | 80.43 |
| Zm00001d011741_P001 | Maize | plastid | 82.71 | 80.29 |
| EES06539 | Sorghum | mitochondrion, plastid | 81.95 | 79.56 |
| Zm00001d043606_P001 | Maize | mitochondrion | 81.95 | 79.56 |
| Zm00001d016276_P002 | Maize | cytosol, mitochondrion | 81.95 | 79.56 |
| TraesCS7D01G366400.1 | Wheat | cytosol, mitochondrion | 81.95 | 79.56 |
| TraesCS7B01G271400.1 | Wheat | cytosol, mitochondrion | 81.95 | 79.56 |
| EES03542 | Sorghum | mitochondrion | 81.95 | 79.56 |
| Os06t0555400-01 | Rice | cytosol, mitochondrion | 68.42 | 79.13 |
| TraesCS7A01G356300.1 | Wheat | golgi, nucleus, unclear | 81.2 | 78.83 |
| Zm00001d039246_P001 | Maize | mitochondrion | 70.68 | 78.33 |
| KRG92744 | Soybean | mitochondrion | 81.2 | 78.26 |
| EER88512 | Sorghum | mitochondrion | 80.45 | 78.1 |
| KRH04217 | Soybean | mitochondrion | 44.36 | 77.63 |
| Zm00001d036985_P001 | Maize | mitochondrion, plastid | 78.95 | 76.64 |
| TraesCS6B01G234000.1 | Wheat | golgi, unclear | 78.2 | 75.91 |
| Os01t0723200-01 | Rice | nucleus | 78.2 | 75.36 |
| Os02t0229000-01 | Rice | nucleus | 78.2 | 75.36 |
| TraesCS3A01G286000.1 | Wheat | cytosol, mitochondrion | 77.44 | 74.64 |
| TraesCS3B01G320300.1 | Wheat | cytosol, mitochondrion | 76.69 | 73.91 |
| TraesCS3D01G285800.1 | Wheat | cytosol, mitochondrion | 76.69 | 73.91 |
| TraesCS6D01G177000.1 | Wheat | mitochondrion, plastid | 78.95 | 72.92 |
| KRH04214 | Soybean | cytosol | 52.63 | 72.16 |
| HORVU3Hr1G068610.1 | Barley | mitochondrion | 72.93 | 70.8 |
| HORVU1Hr1G044880.1 | Barley | mitochondrion, plastid | 56.39 | 70.75 |
| HORVU7Hr1G088580.1 | Barley | mitochondrion, plastid | 80.45 | 62.94 |
| HORVU6Hr1G044840.1 | Barley | plasma membrane | 78.95 | 58.99 |
| KRH64028 | Soybean | mitochondrion | 57.14 | 55.07 |
| HORVU2Hr1G055560.3 | Barley | cytosol, mitochondrion | 56.39 | 53.57 |
| Zm00001d043381_P001 | Maize | cytosol | 33.08 | 48.35 |
| GSMUA_Achr8P20160_001 | Banana | mitochondrion | 57.89 | 38.89 |
Protein Annotations
| MapMan:17.1.3.1.25 | Gene3D:3.30.70.3370 | EntrezGene:832878 | EMBL:AC007627 | ProteinID:AED93771.1 | EMBL:AF386992 |
| ArrayExpress:AT5G28060 | EnsemblPlantsGene:AT5G28060 | RefSeq:AT5G28060 | TAIR:AT5G28060 | RefSeq:AT5G28060-TAIR-G | EnsemblPlants:AT5G28060.1 |
| TAIR:AT5G28060.1 | EMBL:AY072478 | EMBL:AY086740 | GO:GO:0000462 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0022626 | GO:GO:0022627 |
| GO:GO:0030312 | GO:GO:0030529 | GO:GO:0042788 | HAMAP:MF_00545 | RefSeq:NP_198158.1 | PFAM:PD006052 |
| PFAM:PF01282 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00529 | PANTHER:PTHR10496 | PANTHER:PTHR10496:SF5 |
| UniProt:Q8LC83 | InterPro:Ribosomal_L23/L15e_core_dom_sf | InterPro:Ribosomal_S24e | InterPro:Ribosomal_S24e_CS | SUPFAM:SSF54189 | UniParc:UPI00000A60A8 |
| SEG:seg | : | : | : | : | : |
Description
RPS24B40S ribosomal protein S24-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC83]
Coordinates
chr5:-:10069440..10070899
Molecular Weight (calculated)
15420.0 Da
IEP (calculated)
11.239
GRAVY (calculated)
-0.874
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKAVTIRT RNFMTNRLLA RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFCF KFRTHFGGGK SSGYGLIYDT VENAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.