Factsheet for TraesCS7D01G366400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G271400.1	Wheat	cytosol, mitochondrion	100.0	100.0
TraesCS7A01G356300.1	Wheat	golgi, nucleus, unclear	99.27	99.27
EER88512	Sorghum	mitochondrion	94.16	94.16
Zm00001d036985_P001	Maize	mitochondrion, plastid	91.97	91.97
Zm00001d039246_P001	Maize	mitochondrion	79.56	90.83
TraesCS6D01G177000.1	Wheat	mitochondrion, plastid	92.7	88.19
TraesCS3D01G285800.1	Wheat	cytosol, mitochondrion	87.59	86.96
AT3G04920.1	Thale cress	mitochondrion	83.21	85.71
CDY59816	Canola	mitochondrion	83.21	85.71
CDY50766	Canola	mitochondrion	83.21	85.71
CDY41909	Canola	mitochondrion	83.21	85.71
CDY30024	Canola	mitochondrion	83.21	85.71
CDY21104	Canola	mitochondrion	83.21	85.71
CDY00010	Canola	extracellular	83.21	85.71
CDX86189	Canola	mitochondrion	83.21	85.71
CDX80683	Canola	mitochondrion	83.21	85.71
Bra040415.1-P	Field mustard	mitochondrion	83.21	85.71
Bra040115.1-P	Field mustard	mitochondrion	83.21	85.71
Bra036117.1-P	Field mustard	mitochondrion	83.21	85.71
Bra009989.1-P	Field mustard	mitochondrion	83.21	85.71
CDY05587	Canola	mitochondrion	82.48	84.96
CDY52499	Canola	mitochondrion	82.48	84.96
AT5G28060.1	Thale cress	mitochondrion	79.56	81.95
Solyc09g065330.2.1	Tomato	nucleus	79.56	81.95
Solyc06g084230.2.1	Tomato	endoplasmic reticulum, unclear	79.56	81.95
Solyc01g097870.2.1	Tomato	mitochondrion	79.56	81.95
PGSC0003DMT400051640	Potato	extracellular	79.56	81.95
PGSC0003DMT400049836	Potato	mitochondrion	79.56	81.95
GSMUA_AchrUn_...	Banana	mitochondrion	71.53	79.03
HORVU7Hr1G088580.1	Barley	mitochondrion, plastid	97.81	78.82
GSMUA_Achr6P05510_001	Banana	mitochondrion	78.83	78.26
GSMUA_Achr4P30950_001	Banana	mitochondrion	70.8	78.23
KRG96941	Soybean	nucleus	78.1	78.1
GSMUA_Achr2P15660_001	Banana	mitochondrion	78.1	77.54
GSMUA_Achr9P28760_001	Banana	mitochondrion	78.1	77.54
KRH68706	Soybean	endoplasmic reticulum	77.37	77.37
CDX74161	Canola	mitochondrion	54.74	77.32
VIT_14s0030g01620.t01	Wine grape	mitochondrion	76.64	76.64
VIT_07s0151g00900.t01	Wine grape	mitochondrion	75.91	75.91
KRH34063	Soybean	mitochondrion	75.91	75.91
KRG92744	Soybean	mitochondrion	71.53	71.01
KRH04214	Soybean	cytosol	46.72	65.98
KRH04217	Soybean	mitochondrion	36.5	65.79
KRH64028	Soybean	mitochondrion	52.55	52.17
GSMUA_Achr8P20160_001	Banana	mitochondrion	54.74	37.88

Protein Annotations

MapMan:17.1.3.1.25	Gene3D:3.30.70.3370	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	HAMAP:MF_00545	PFAM:PD006052
PFAM:PF01282	ScanProsite:PS00529	PANTHER:PTHR10496	PANTHER:PTHR10496:SF5	InterPro:Ribosomal_L23/L15e_core_dom_sf	InterPro:Ribosomal_S24e
InterPro:Ribosomal_S24e_CS	SUPFAM:SSF54189	EnsemblPlantsGene:TraesCS7D01G366400	EnsemblPlants:TraesCS7D01G366400.1	SEG:seg	:

Description

No Description!

Coordinates

chr7D:-:474082721..474084779

Molecular Weight (calculated)

15700.4 Da

IEP (calculated)

11.418

GRAVY (calculated)

-0.744

Length

137 amino acids

Sequence
(BLAST)

001: MADAKATTAV TLRTRKFMTN RLLARKQFVL EVIHPGRANV SKAELKERLA KVYEVKDPNC IFVFKFRTHF GGGKSSGFGL IYDNLESAKK FEPKYRLIRN
101: GLATKVEKSR KQIKERKNRT KKIRGVKKTK AGDAKKK

Best Arabidopsis Sequence Match ( AT3G04920.1 )
(BLAST)

001: MAEKAVTIRT RKFMTNRLLS RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFVF KFRTHFGGGK SSGFGLIYDT VESAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDA KKK

Arabidopsis Description

RPS24A40S ribosomal protein S24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS17]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.