Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH04217 | Soybean | mitochondrion | 51.55 | 65.79 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 79.38 | 62.1 |
| Os06t0555400-01 | Rice | cytosol, mitochondrion | 72.16 | 60.87 |
| KRH34063 | Soybean | mitochondrion | 85.57 | 60.58 |
| GSMUA_Achr4P30950_001 | Banana | mitochondrion | 77.32 | 60.48 |
| KRH68706 | Soybean | endoplasmic reticulum | 84.54 | 59.85 |
| KRG96941 | Soybean | nucleus | 83.51 | 59.12 |
| GSMUA_Achr6P05510_001 | Banana | mitochondrion | 80.41 | 56.52 |
| Solyc06g084230.2.1 | Tomato | endoplasmic reticulum, unclear | 76.29 | 55.64 |
| AT3G04920.1 | Thale cress | mitochondrion | 76.29 | 55.64 |
| GSMUA_Achr9P28760_001 | Banana | mitochondrion | 78.35 | 55.07 |
| GSMUA_Achr2P15660_001 | Banana | mitochondrion | 78.35 | 55.07 |
| PGSC0003DMT400049836 | Potato | mitochondrion | 75.26 | 54.89 |
| PGSC0003DMT400051640 | Potato | extracellular | 75.26 | 54.89 |
| Solyc09g065330.2.1 | Tomato | nucleus | 75.26 | 54.89 |
| CDY59816 | Canola | mitochondrion | 75.26 | 54.89 |
| CDY52499 | Canola | mitochondrion | 75.26 | 54.89 |
| CDY50766 | Canola | mitochondrion | 75.26 | 54.89 |
| CDY41909 | Canola | mitochondrion | 75.26 | 54.89 |
| CDY30024 | Canola | mitochondrion | 75.26 | 54.89 |
| CDY21104 | Canola | mitochondrion | 75.26 | 54.89 |
| CDY05587 | Canola | mitochondrion | 75.26 | 54.89 |
| CDY00010 | Canola | extracellular | 75.26 | 54.89 |
| CDX86189 | Canola | mitochondrion | 75.26 | 54.89 |
| CDX80683 | Canola | mitochondrion | 75.26 | 54.89 |
| Bra040415.1-P | Field mustard | mitochondrion | 75.26 | 54.89 |
| Bra040115.1-P | Field mustard | mitochondrion | 75.26 | 54.89 |
| Bra036117.1-P | Field mustard | mitochondrion | 75.26 | 54.89 |
| Bra009989.1-P | Field mustard | mitochondrion | 75.26 | 54.89 |
| VIT_14s0030g01620.t01 | Wine grape | mitochondrion | 77.32 | 54.74 |
| Zm00001d039246_P001 | Maize | mitochondrion | 65.98 | 53.33 |
| AT5G28060.1 | Thale cress | mitochondrion | 72.16 | 52.63 |
| KRG92744 | Soybean | mitochondrion | 74.23 | 52.17 |
| EES06539 | Sorghum | mitochondrion, plastid | 72.16 | 51.09 |
| Zm00001d016276_P002 | Maize | cytosol, mitochondrion | 72.16 | 51.09 |
| Os02t0229000-01 | Rice | nucleus | 72.16 | 50.72 |
| Zm00001d011741_P001 | Maize | plastid | 71.13 | 50.37 |
| Os01t0723200-01 | Rice | nucleus | 71.13 | 50.0 |
| Zm00001d043606_P001 | Maize | mitochondrion | 70.1 | 49.63 |
| EES03542 | Sorghum | mitochondrion | 70.1 | 49.63 |
| TraesCS3A01G286000.1 | Wheat | cytosol, mitochondrion | 70.1 | 49.28 |
| TraesCS3B01G320300.1 | Wheat | cytosol, mitochondrion | 70.1 | 49.28 |
| TraesCS3D01G285800.1 | Wheat | cytosol, mitochondrion | 70.1 | 49.28 |
| EER88512 | Sorghum | mitochondrion | 69.07 | 48.91 |
| Zm00001d036985_P001 | Maize | mitochondrion, plastid | 68.04 | 48.18 |
| TraesCS6B01G234000.1 | Wheat | golgi, unclear | 67.01 | 47.45 |
| HORVU3Hr1G068610.1 | Barley | mitochondrion | 65.98 | 46.72 |
| TraesCS7A01G356300.1 | Wheat | golgi, nucleus, unclear | 65.98 | 46.72 |
| TraesCS7B01G271400.1 | Wheat | cytosol, mitochondrion | 65.98 | 46.72 |
| TraesCS7D01G366400.1 | Wheat | cytosol, mitochondrion | 65.98 | 46.72 |
| TraesCS6D01G177000.1 | Wheat | mitochondrion, plastid | 68.04 | 45.83 |
| CDX74161 | Canola | mitochondrion | 45.36 | 45.36 |
| HORVU7Hr1G088580.1 | Barley | mitochondrion, plastid | 64.95 | 37.06 |
| HORVU6Hr1G044840.1 | Barley | plasma membrane | 67.01 | 36.52 |
| HORVU1Hr1G044880.1 | Barley | mitochondrion, plastid | 39.18 | 35.85 |
| KRH64028 | Soybean | mitochondrion | 47.42 | 33.33 |
| Zm00001d043381_P001 | Maize | cytosol | 30.93 | 32.97 |
| HORVU2Hr1G055560.3 | Barley | cytosol, mitochondrion | 42.27 | 29.29 |
| GSMUA_Achr8P20160_001 | Banana | mitochondrion | 52.58 | 25.76 |
Protein Annotations
| Gene3D:3.30.70.3370 | MapMan:35.2 | UniProt:A0A0R0FDB3 | EMBL:ACUP02010392 | EnsemblPlantsGene:GLYMA_17G146800 | GO:GO:0000462 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022627 | EnsemblPlants:KRH04214 |
| ProteinID:KRH04214 | ProteinID:KRH04214.1 | PFAM:PD006052 | PFAM:PF01282 | PANTHER:PTHR10496 | PANTHER:PTHR10496:SF9 |
| InterPro:Ribosomal_L23/L15e_core_dom_sf | InterPro:Ribosomal_S24e | SUPFAM:SSF54189 | UniParc:UPI0006EE1531 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:+:12112968..12113317
Molecular Weight (calculated)
10873.4 Da
IEP (calculated)
11.466
GRAVY (calculated)
-0.938
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MSLKQFVIDV LHPGSANVSK AELKEKLRRM YDGKGTNLVF VFKFRTHFGG GKSTGFGLSG KEEKSRKQMK ERKNRAKKIR GVQKTKASDA AKTGKKK
001: MAEKAVTIRT RNFMTNRLLA RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFCF KFRTHFGGGK SSGYGLIYDT VENAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK
Arabidopsis Description
RPS24B40S ribosomal protein S24-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC83]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.