Factsheet for HORVU7Hr1G088580.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G271400.1	Wheat	cytosol, mitochondrion	78.82	97.81
TraesCS7D01G366400.1	Wheat	cytosol, mitochondrion	78.82	97.81
TraesCS7A01G356300.1	Wheat	golgi, nucleus, unclear	78.24	97.08
EER88512	Sorghum	mitochondrion	75.29	93.43
Zm00001d036985_P001	Maize	mitochondrion, plastid	73.53	91.24
Zm00001d039246_P001	Maize	mitochondrion	63.53	90.0
HORVU1Hr1G044880.1	Barley	mitochondrion, plastid	52.94	84.91
AT3G04920.1	Thale cress	mitochondrion	65.29	83.46
CDY59816	Canola	mitochondrion	65.29	83.46
CDY50766	Canola	mitochondrion	65.29	83.46
CDY41909	Canola	mitochondrion	65.29	83.46
CDY30024	Canola	mitochondrion	65.29	83.46
CDY21104	Canola	mitochondrion	65.29	83.46
CDY00010	Canola	extracellular	65.29	83.46
Bra009989.1-P	Field mustard	mitochondrion	65.29	83.46
CDX86189	Canola	mitochondrion	65.29	83.46
CDX80683	Canola	mitochondrion	65.29	83.46
Bra040415.1-P	Field mustard	mitochondrion	65.29	83.46
Bra040115.1-P	Field mustard	mitochondrion	65.29	83.46
Bra036117.1-P	Field mustard	mitochondrion	65.29	83.46
CDY05587	Canola	mitochondrion	64.71	82.71
CDY52499	Canola	mitochondrion	64.71	82.71
Solyc09g065330.2.1	Tomato	nucleus	64.12	81.95
Solyc06g084230.2.1	Tomato	endoplasmic reticulum, unclear	64.12	81.95
PGSC0003DMT400051640	Potato	extracellular	64.12	81.95
PGSC0003DMT400049836	Potato	mitochondrion	64.12	81.95
HORVU3Hr1G068610.1	Barley	mitochondrion	65.29	81.02
AT5G28060.1	Thale cress	mitochondrion	62.94	80.45
Solyc01g097870.2.1	Tomato	mitochondrion	62.94	80.45
GSMUA_AchrUn_...	Banana	mitochondrion	56.47	77.42
GSMUA_Achr6P05510_001	Banana	mitochondrion	62.35	76.81
KRG96941	Soybean	nucleus	61.76	76.64
VIT_14s0030g01620.t01	Wine grape	mitochondrion	61.76	76.64
GSMUA_Achr4P30950_001	Banana	mitochondrion	55.88	76.61
GSMUA_Achr2P15660_001	Banana	mitochondrion	61.76	76.09
GSMUA_Achr9P28760_001	Banana	mitochondrion	61.76	76.09
KRH68706	Soybean	endoplasmic reticulum	61.18	75.91
VIT_07s0151g00900.t01	Wine grape	mitochondrion	61.18	75.91
KRH34063	Soybean	mitochondrion	60.59	75.18
CDX74161	Canola	mitochondrion	42.35	74.23
HORVU6Hr1G044840.1	Barley	plasma membrane	77.06	73.6
KRG92744	Soybean	mitochondrion	57.06	70.29
HORVU2Hr1G055560.3	Barley	cytosol, mitochondrion	55.29	67.14
KRH04214	Soybean	cytosol	37.06	64.95
KRH04217	Soybean	mitochondrion	28.82	64.47
KRH64028	Soybean	mitochondrion	41.76	51.45
GSMUA_Achr8P20160_001	Banana	mitochondrion	42.94	36.87

Protein Annotations

MapMan:17.1.3.1.25	Gene3D:3.30.70.3370	UniProt:A0A287X8K8	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529
EnsemblPlantsGene:HORVU7Hr1G088580	EnsemblPlants:HORVU7Hr1G088580.1	HAMAP:MF_00545	PFAM:PD006052	PFAM:PF01282	ScanProsite:PS00529
PANTHER:PTHR10496	PANTHER:PTHR10496:SF5	InterPro:Ribosomal_L23/L15e_core_dom_sf	InterPro:Ribosomal_S24e	InterPro:Ribosomal_S24e_CS	SUPFAM:SSF54189
UniParc:UPI000B487401	SEG:seg	:	:	:	:

Description

40S ribosomal protein S24 [Source:UniProtKB/TrEMBL;Acc:A0A287X8K8]

Coordinates

chrchr7H:-:537951250..537953582

Molecular Weight (calculated)

19034.3 Da

IEP (calculated)

11.323

GRAVY (calculated)

-0.608

Length

170 amino acids

Sequence
(BLAST)

001: PLFYLRFPPS RSAAAAAATS CAGSPPRSEV ESAMADAKAT TAVTLRTRKF MTNRLLARKQ FVLEVIHPGR ANVSKAELKD RLSKVYEVKD PNCIFVFKFR
101: THFGGGKSSG FGLIYDNLEA AKKFEPKYRL IRNGLATKVE KSRKQIKERK NRTKKIRGVK KTKAGDAKKK

Best Arabidopsis Sequence Match ( AT3G04920.1 )
(BLAST)

001: MAEKAVTIRT RKFMTNRLLS RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFVF KFRTHFGGGK SSGFGLIYDT VESAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDA KKK

Arabidopsis Description

RPS24A40S ribosomal protein S24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS17]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.