Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036985_P001 | Maize | mitochondrion, plastid | 97.5 | 85.4 |
| EER88512 | Sorghum | mitochondrion | 93.33 | 81.75 |
| Zm00001d043606_P001 | Maize | mitochondrion | 92.5 | 81.02 |
| Zm00001d016276_P002 | Maize | cytosol, mitochondrion | 91.67 | 80.29 |
| Zm00001d011741_P001 | Maize | plastid | 91.67 | 80.29 |
| TraesCS7D01G366400.1 | Wheat | cytosol, mitochondrion | 90.83 | 79.56 |
| TraesCS7B01G271400.1 | Wheat | cytosol, mitochondrion | 90.83 | 79.56 |
| TraesCS7A01G356300.1 | Wheat | golgi, nucleus, unclear | 90.83 | 79.56 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 80.83 | 78.23 |
| GSMUA_Achr4P30950_001 | Banana | mitochondrion | 80.83 | 78.23 |
| CDY21104 | Canola | mitochondrion | 82.5 | 74.44 |
| CDX80683 | Canola | mitochondrion | 82.5 | 74.44 |
| Bra040415.1-P | Field mustard | mitochondrion | 82.5 | 74.44 |
| Bra040115.1-P | Field mustard | mitochondrion | 82.5 | 74.44 |
| Bra036117.1-P | Field mustard | mitochondrion | 82.5 | 74.44 |
| Bra009989.1-P | Field mustard | mitochondrion | 82.5 | 74.44 |
| AT3G04920.1 | Thale cress | mitochondrion | 82.5 | 74.44 |
| CDY05587 | Canola | mitochondrion | 82.5 | 74.44 |
| CDX86189 | Canola | mitochondrion | 82.5 | 74.44 |
| CDY00010 | Canola | extracellular | 82.5 | 74.44 |
| CDY59816 | Canola | mitochondrion | 82.5 | 74.44 |
| CDY52499 | Canola | mitochondrion | 82.5 | 74.44 |
| CDY50766 | Canola | mitochondrion | 82.5 | 74.44 |
| CDY41909 | Canola | mitochondrion | 82.5 | 74.44 |
| CDY30024 | Canola | mitochondrion | 82.5 | 74.44 |
| Solyc09g065330.2.1 | Tomato | nucleus | 81.67 | 73.68 |
| Solyc06g084230.2.1 | Tomato | endoplasmic reticulum, unclear | 81.67 | 73.68 |
| Solyc01g097870.2.1 | Tomato | mitochondrion | 81.67 | 73.68 |
| PGSC0003DMT400051640 | Potato | extracellular | 81.67 | 73.68 |
| PGSC0003DMT400049836 | Potato | mitochondrion | 81.67 | 73.68 |
| GSMUA_Achr9P28760_001 | Banana | mitochondrion | 83.33 | 72.46 |
| GSMUA_Achr2P15660_001 | Banana | mitochondrion | 82.5 | 71.74 |
| GSMUA_Achr6P05510_001 | Banana | mitochondrion | 81.67 | 71.01 |
| VIT_07s0151g00900.t01 | Wine grape | mitochondrion | 80.83 | 70.8 |
| VIT_14s0030g01620.t01 | Wine grape | mitochondrion | 80.83 | 70.8 |
| KRG96941 | Soybean | nucleus | 80.83 | 70.8 |
| AT5G28060.1 | Thale cress | mitochondrion | 78.33 | 70.68 |
| KRH68706 | Soybean | endoplasmic reticulum | 80.0 | 70.07 |
| KRH34063 | Soybean | mitochondrion | 78.33 | 68.61 |
| KRH04214 | Soybean | cytosol | 53.33 | 65.98 |
| CDX74161 | Canola | mitochondrion | 52.5 | 64.95 |
| KRG92744 | Soybean | mitochondrion | 74.17 | 64.49 |
| HORVU7Hr1G088580.1 | Barley | mitochondrion, plastid | 90.0 | 63.53 |
| Zm00001d043381_P001 | Maize | cytosol | 40.0 | 52.75 |
| KRH04217 | Soybean | mitochondrion | 33.33 | 52.63 |
| KRH64028 | Soybean | mitochondrion | 53.33 | 46.38 |
| GSMUA_Achr8P20160_001 | Banana | mitochondrion | 55.83 | 33.84 |
Protein Annotations
| EntrezGene:103649528 | MapMan:17.1.3.1.25 | Gene3D:3.30.70.3370 | UniProt:A0A1D6MEQ1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0030529 | HAMAP:MF_00545 | ProteinID:ONM28115.1 | PFAM:PD006052 | PFAM:PF01282 |
| ScanProsite:PS00529 | PANTHER:PTHR10496 | PANTHER:PTHR10496:SF5 | InterPro:Ribosomal_L23/L15e_core_dom_sf | InterPro:Ribosomal_S24e | InterPro:Ribosomal_S24e_CS |
| SUPFAM:SSF54189 | UniParc:UPI0004DE91F6 | EnsemblPlantsGene:Zm00001d039246 | EnsemblPlants:Zm00001d039246_P001 | EnsemblPlants:Zm00001d039246_T001 | SEG:seg |
Description
40S ribosomal protein S24-1
Coordinates
chr3:-:480469..481982
Molecular Weight (calculated)
13947.3 Da
IEP (calculated)
11.141
GRAVY (calculated)
-0.896
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNRLLSRKQ FMLEVIHPGR PNVSKAELKE RLAKIYEVKD PDCIFVFKFR TNFGGGKSTG FGLIYDNLEA AKKFEPKYRL IRNDLATKVE KSRKQMKERK
101: NRAKKIRGVK KTKAGDAKKK
101: NRAKKIRGVK KTKAGDAKKK
001: MAEKAVTIRT RKFMTNRLLS RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFVF KFRTHFGGGK SSGFGLIYDT VESAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDA KKK
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDA KKK
Arabidopsis Description
RPS24A40S ribosomal protein S24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS17]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.