CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04217	Soybean	mitochondrion	56.7	72.37
CDX80683	Canola	mitochondrion	91.75	66.92
CDY59816	Canola	mitochondrion	91.75	66.92
CDY50766	Canola	mitochondrion	91.75	66.92
CDY41909	Canola	mitochondrion	91.75	66.92
CDY30024	Canola	mitochondrion	91.75	66.92
CDY00010	Canola	extracellular	91.75	66.92
CDX86189	Canola	mitochondrion	91.75	66.92
CDY21104	Canola	mitochondrion	91.75	66.92
CDY05587	Canola	mitochondrion	90.72	66.17
CDY52499	Canola	mitochondrion	90.72	66.17
AT3G04920.1	Thale cress	mitochondrion	90.72	66.17
HORVU1Hr1G044880.1	Barley	mitochondrion, plastid	70.1	64.15
Solyc09g065330.2.1	Tomato	nucleus	84.54	61.65
Solyc06g084230.2.1	Tomato	endoplasmic reticulum, unclear	84.54	61.65
Solyc01g097870.2.1	Tomato	mitochondrion	84.54	61.65
PGSC0003DMT400051640	Potato	extracellular	84.54	61.65
PGSC0003DMT400049836	Potato	mitochondrion	84.54	61.65
KRG96941	Soybean	nucleus	84.54	59.85
KRH68706	Soybean	endoplasmic reticulum	82.47	58.39
VIT_14s0030g01620.t01	Wine grape	mitochondrion	82.47	58.39
KRH34063	Soybean	mitochondrion	81.44	57.66
Zm00001d016276_P002	Maize	cytosol, mitochondrion	80.41	56.93
VIT_07s0151g00900.t01	Wine grape	mitochondrion	80.41	56.93
KRG92744	Soybean	mitochondrion	80.41	56.52
GSMUA_Achr9P28760_001	Banana	mitochondrion	80.41	56.52
GSMUA_Achr6P05510_001	Banana	mitochondrion	80.41	56.52
Zm00001d011741_P001	Maize	plastid	79.38	56.2
GSMUA_Achr2P15660_001	Banana	mitochondrion	79.38	55.8
GSMUA_AchrUn_...	Banana	mitochondrion	71.13	55.65
EES06539	Sorghum	mitochondrion, plastid	78.35	55.47
Zm00001d043606_P001	Maize	mitochondrion	77.32	54.74
TraesCS7D01G366400.1	Wheat	cytosol, mitochondrion	77.32	54.74
TraesCS7B01G271400.1	Wheat	cytosol, mitochondrion	77.32	54.74
EES03542	Sorghum	mitochondrion	77.32	54.74
GSMUA_Achr4P30950_001	Banana	mitochondrion	69.07	54.03
TraesCS7A01G356300.1	Wheat	golgi, nucleus, unclear	76.29	54.01
Zm00001d036985_P001	Maize	mitochondrion, plastid	75.26	53.28
EER88512	Sorghum	mitochondrion	75.26	53.28
Os06t0555400-01	Rice	cytosol, mitochondrion	62.89	53.04
Os01t0723200-01	Rice	nucleus	75.26	52.9
Os02t0229000-01	Rice	nucleus	75.26	52.9
TraesCS6B01G234000.1	Wheat	golgi, unclear	74.23	52.55
Zm00001d039246_P001	Maize	mitochondrion	64.95	52.5
TraesCS3A01G286000.1	Wheat	cytosol, mitochondrion	74.23	52.17
TraesCS3B01G320300.1	Wheat	cytosol, mitochondrion	73.2	51.45
TraesCS3D01G285800.1	Wheat	cytosol, mitochondrion	73.2	51.45
TraesCS6D01G177000.1	Wheat	mitochondrion, plastid	75.26	50.69
HORVU2Hr1G055560.3	Barley	cytosol, mitochondrion	71.13	49.29
HORVU3Hr1G068610.1	Barley	mitochondrion	69.07	48.91
Zm00001d043381_P001	Maize	cytosol	45.36	48.35
KRH04214	Soybean	cytosol	45.36	45.36
HORVU7Hr1G088580.1	Barley	mitochondrion, plastid	74.23	42.35
HORVU6Hr1G044840.1	Barley	plasma membrane	74.23	40.45
KRH64028	Soybean	mitochondrion	56.7	39.86
GSMUA_Achr8P20160_001	Banana	mitochondrion	51.55	25.25

Protein Annotations

MapMan:17.1.3.1.25	Gene3D:3.30.70.3370	GO:A0A078CAQ2	EnsemblPlants:CDX74161	ProteinID:CDX74161	ProteinID:CDX74161.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00111923001	HAMAP:MF_00545	PFAM:PD006052	PFAM:PF01282
PANTHER:PTHR10496	PANTHER:PTHR10496:SF5	InterPro:Ribosomal_L23/L15e_core_dom_sf	InterPro:Ribosomal_S24e	SUPFAM:SSF54189	UniParc:UPI0004EDCBF1

Description

BnaA03g28860D

Coordinates

chrLK031800:-:1602176..1603201

Molecular Weight (calculated)

11455.3 Da

IEP (calculated)

11.044

GRAVY (calculated)

-0.171

Length

97 amino acids

Sequence
(BLAST)

1: MAEKAVIIRT RKFMINRLLS RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFVF KFRTHFGGFG LIYDNVESAK KFEPKYRLIR LSFSLFQ

Best Arabidopsis Sequence Match ( AT3G04920.1 )
(BLAST)

001: MAEKAVTIRT RKFMTNRLLS RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFVF KFRTHFGGGK SSGFGLIYDT VESAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDA KKK

Arabidopsis Description

RPS24A40S ribosomal protein S24-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS17]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.