Factsheet for HORVU1Hr1G044880.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74161	Canola	mitochondrion	64.15	70.1
KRH04217	Soybean	mitochondrion	46.23	64.47
HORVU2Hr1G055560.3	Barley	cytosol, mitochondrion	82.08	62.14
CDY59816	Canola	mitochondrion	71.7	57.14
CDY50766	Canola	mitochondrion	71.7	57.14
CDY41909	Canola	mitochondrion	71.7	57.14
CDY30024	Canola	mitochondrion	71.7	57.14
CDY21104	Canola	mitochondrion	71.7	57.14
CDY00010	Canola	extracellular	71.7	57.14
CDX86189	Canola	mitochondrion	71.7	57.14
CDX80683	Canola	mitochondrion	71.7	57.14
Bra040415.1-P	Field mustard	mitochondrion	71.7	57.14
Bra040115.1-P	Field mustard	mitochondrion	71.7	57.14
Bra036117.1-P	Field mustard	mitochondrion	71.7	57.14
Bra009989.1-P	Field mustard	mitochondrion	71.7	57.14
AT3G04920.1	Thale cress	mitochondrion	70.75	56.39
CDY52499	Canola	mitochondrion	70.75	56.39
CDY05587	Canola	mitochondrion	70.75	56.39
AT5G28060.1	Thale cress	mitochondrion	70.75	56.39
Solyc09g065330.2.1	Tomato	nucleus	69.81	55.64
Solyc06g084230.2.1	Tomato	endoplasmic reticulum, unclear	69.81	55.64
PGSC0003DMT400051640	Potato	extracellular	69.81	55.64
PGSC0003DMT400049836	Potato	mitochondrion	69.81	55.64
Solyc01g097870.2.1	Tomato	mitochondrion	67.92	54.14
HORVU3Hr1G068610.1	Barley	mitochondrion	68.87	53.28
HORVU7Hr1G088580.1	Barley	mitochondrion, plastid	84.91	52.94
KRH68706	Soybean	endoplasmic reticulum	67.92	52.55
KRG96941	Soybean	nucleus	67.92	52.55
KRH34063	Soybean	mitochondrion	66.98	51.82
Zm00001d043381_P001	Maize	cytosol	44.34	51.65
GSMUA_Achr9P28760_001	Banana	mitochondrion	66.98	51.45
GSMUA_Achr6P05510_001	Banana	mitochondrion	66.98	51.45
VIT_14s0030g01620.t01	Wine grape	mitochondrion	66.04	51.09
KRG92744	Soybean	mitochondrion	66.04	50.72
GSMUA_Achr2P15660_001	Banana	mitochondrion	66.04	50.72
VIT_07s0151g00900.t01	Wine grape	mitochondrion	65.09	50.37
GSMUA_AchrUn_...	Banana	mitochondrion	58.49	50.0
GSMUA_Achr4P30950_001	Banana	mitochondrion	58.49	50.0
HORVU6Hr1G044840.1	Barley	plasma membrane	78.3	46.63
KRH04214	Soybean	cytosol	35.85	39.18
KRH64028	Soybean	mitochondrion	48.11	36.96
GSMUA_Achr8P20160_001	Banana	mitochondrion	41.51	22.22

Protein Annotations

MapMan:17.1.3.1.25	Gene3D:3.30.70.3370	UniProt:A0A287FD47	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G044880
EnsemblPlants:HORVU1Hr1G044880.1	HAMAP:MF_00545	PFAM:PD006052	PFAM:PF01282	PANTHER:PTHR10496	PANTHER:PTHR10496:SF5
InterPro:Ribosomal_L23/L15e_core_dom_sf	InterPro:Ribosomal_S24e	SUPFAM:SSF54189	UniParc:UPI000B469CFB	:	:

Description

No Description!

Coordinates

chrchr1H:-:325991028..325993366

Molecular Weight (calculated)

12222.2 Da

IEP (calculated)

11.260

GRAVY (calculated)

-0.362

Length

106 amino acids

Sequence
(BLAST)

001: MADAKAMTAV TLRTRKFMTN RLLARKQFVL EVIHPGRANL SKAELTEKLS KVYKVKDPNC IFAFKFRTHF RGSKSSGIGL IYDNLEAAKK FEPKYRLIRT
101: RGPQLF

Best Arabidopsis Sequence Match ( AT5G28060.1 )
(BLAST)

001: MAEKAVTIRT RNFMTNRLLA RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFCF KFRTHFGGGK SSGYGLIYDT VENAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK

Arabidopsis Description

RPS24B40S ribosomal protein S24-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC83]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.