Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G234000.1 | Wheat | golgi, unclear | 94.44 | 99.27 |
| Os02t0229000-01 | Rice | nucleus | 88.89 | 92.75 |
| TraesCS7D01G366400.1 | Wheat | cytosol, mitochondrion | 88.19 | 92.7 |
| Os06t0555400-01 | Rice | cytosol, mitochondrion | 73.61 | 92.17 |
| Zm00001d016276_P002 | Maize | cytosol, mitochondrion | 86.11 | 90.51 |
| EES06539 | Sorghum | mitochondrion, plastid | 86.11 | 90.51 |
| TraesCS3D01G285800.1 | Wheat | cytosol, mitochondrion | 83.33 | 86.96 |
| CDY52499 | Canola | mitochondrion | 77.08 | 83.46 |
| CDY59816 | Canola | mitochondrion | 77.08 | 83.46 |
| CDY50766 | Canola | mitochondrion | 77.08 | 83.46 |
| CDY41909 | Canola | mitochondrion | 77.08 | 83.46 |
| CDY30024 | Canola | mitochondrion | 77.08 | 83.46 |
| Bra036117.1-P | Field mustard | mitochondrion | 77.08 | 83.46 |
| AT3G04920.1 | Thale cress | mitochondrion | 77.08 | 83.46 |
| Bra009989.1-P | Field mustard | mitochondrion | 77.08 | 83.46 |
| CDY21104 | Canola | mitochondrion | 77.08 | 83.46 |
| Bra040115.1-P | Field mustard | mitochondrion | 77.08 | 83.46 |
| Bra040415.1-P | Field mustard | mitochondrion | 77.08 | 83.46 |
| CDX80683 | Canola | mitochondrion | 77.08 | 83.46 |
| CDX86189 | Canola | mitochondrion | 77.08 | 83.46 |
| CDY00010 | Canola | extracellular | 77.08 | 83.46 |
| CDY05587 | Canola | mitochondrion | 77.08 | 83.46 |
| Solyc01g097870.2.1 | Tomato | mitochondrion | 75.0 | 81.2 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 69.44 | 80.65 |
| Solyc09g065330.2.1 | Tomato | nucleus | 74.31 | 80.45 |
| Solyc06g084230.2.1 | Tomato | endoplasmic reticulum, unclear | 74.31 | 80.45 |
| PGSC0003DMT400051640 | Potato | extracellular | 74.31 | 80.45 |
| PGSC0003DMT400049836 | Potato | mitochondrion | 74.31 | 80.45 |
| GSMUA_Achr6P05510_001 | Banana | mitochondrion | 75.69 | 78.99 |
| AT5G28060.1 | Thale cress | mitochondrion | 72.92 | 78.95 |
| GSMUA_Achr9P28760_001 | Banana | mitochondrion | 75.0 | 78.26 |
| GSMUA_Achr2P15660_001 | Banana | mitochondrion | 75.0 | 78.26 |
| GSMUA_Achr4P30950_001 | Banana | mitochondrion | 67.36 | 78.23 |
| KRG96941 | Soybean | nucleus | 74.31 | 78.1 |
| KRH68706 | Soybean | endoplasmic reticulum | 73.61 | 77.37 |
| KRH34063 | Soybean | mitochondrion | 72.92 | 76.64 |
| VIT_14s0030g01620.t01 | Wine grape | mitochondrion | 72.92 | 76.64 |
| VIT_07s0151g00900.t01 | Wine grape | mitochondrion | 72.22 | 75.91 |
| HORVU6Hr1G044840.1 | Barley | plasma membrane | 93.75 | 75.84 |
| CDX74161 | Canola | mitochondrion | 50.69 | 75.26 |
| KRG92744 | Soybean | mitochondrion | 68.75 | 71.74 |
| KRH04214 | Soybean | cytosol | 45.83 | 68.04 |
| KRH04217 | Soybean | mitochondrion | 35.42 | 67.11 |
| KRH64028 | Soybean | mitochondrion | 50.0 | 52.17 |
| GSMUA_Achr8P20160_001 | Banana | mitochondrion | 53.47 | 38.89 |
Protein Annotations
| MapMan:17.1.3.1.25 | Gene3D:3.30.70.3370 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | HAMAP:MF_00545 | PFAM:PD006052 |
| PFAM:PF01282 | ScanProsite:PS00529 | PANTHER:PTHR10496 | PANTHER:PTHR10496:SF9 | InterPro:Ribosomal_L23/L15e_core_dom_sf | InterPro:Ribosomal_S24e |
| InterPro:Ribosomal_S24e_CS | SUPFAM:SSF54189 | EnsemblPlantsGene:TraesCS6D01G177000 | EnsemblPlants:TraesCS6D01G177000.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr6D:-:176479132..176481108
Molecular Weight (calculated)
16502.4 Da
IEP (calculated)
11.412
GRAVY (calculated)
-0.794
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAKTAPAV TLRTRKFMTN RLLSRKQFVL EVIHPGRANV SKADPRMSQS DLKERLAKIY EVKDSNCIFV FKFRTHFGGG KSTGFGLIYD NLEAAKKFEP
101: KYRLIRNGLA TKVEKSRKQI KERKNRTKKI RGVKKTKAGD AKKK
101: KYRLIRNGLA TKVEKSRKQI KERKNRTKKI RGVKKTKAGD AKKK
001: MAEKAVTIRT RNFMTNRLLA RKQFVIDVLH PGRANVSKAE LKEKLARMYE VKDPNAIFCF KFRTHFGGGK SSGYGLIYDT VENAKKFEPK YRLIRNGLDT
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK
101: KIEKSRKQIK ERKNRAKKIR GVKKTKAGDT KKK
Arabidopsis Description
RPS24B40S ribosomal protein S24-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LC83]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.