Factsheet for Zm00001d006461_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006152_P001	Maize	nucleus	41.95	98.65
Zm00001d008747_P001	Maize	nucleus	47.7	98.22
EER99434	Sorghum	cytosol	95.69	95.69
Os07t0508300-01	Rice	plasma membrane	87.64	87.64
TraesCS2D01G231700.1	Wheat	cytosol	84.77	85.51
TraesCS2A01G226200.1	Wheat	cytosol	84.48	85.22
TraesCS2B01G249500.1	Wheat	cytosol	84.2	84.93
GSMUA_Achr9P02630_001	Banana	mitochondrion	62.64	69.43
HORVU2Hr1G047840.1	Barley	cytosol	27.01	64.38
Zm00001d022555_P001	Maize	cytosol, mitochondrion	74.14	63.24
KRH42945	Soybean	endoplasmic reticulum	62.64	62.64
VIT_10s0003g02590.t01	Wine grape	cytosol	62.07	62.07
Zm00001d022556_P001	Maize	cytosol	66.09	61.66
KRH59070	Soybean	cytosol	62.93	61.52
AT4G18060.1	Thale cress	cytosol, mitochondrion	61.21	60.68
PGSC0003DMT400007954	Potato	cytosol	60.63	59.77
CDY01515	Canola	cytosol, mitochondrion	59.48	58.97
Bra012620.1-P	Field mustard	mitochondrion	59.2	58.69
CDX90424	Canola	mitochondrion	59.2	58.69
Solyc02g071330.2.1	Tomato	cytosol	53.45	58.68
Zm00001d024355_P001	Maize	cytosol	8.05	53.85
Zm00001d013860_P012	Maize	cytosol	49.14	45.6
Zm00001d002810_P001	Maize	plasma membrane	47.7	45.11
Zm00001d032465_P002	Maize	cytosol	48.85	43.48
Zm00001d025955_P001	Maize	cytosol, mitochondrion	46.55	42.74
GSMUA_Achr6P29510_001	Banana	cytosol	56.03	38.01
Zm00001d042379_P001	Maize	peroxisome	11.49	35.4
Zm00001d028558_P003	Maize	cytosol	37.64	33.16

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:35.1	InterPro:AH/BAR_dom_sf	UniProt:B6T6P3	EMBL:BT055505
ncoils:Coil	EMBL:EU960658	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452
InterPro:IPR027267	ProteinID:ONM23945.1	PFAM:PF14604	PRINTS:PR00499	PFscan:PS50002	PANTHER:PTHR44109
PANTHER:PTHR44109:SF5	InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044
UniParc:UPI000182CD4A	EnsemblPlantsGene:Zm00001d006461	EnsemblPlants:Zm00001d006461_P001	EnsemblPlants:Zm00001d006461_T001	SEG:seg	:

Description

SH3 domain-containing protein 3

Coordinates

chr2:-:208886176..208891423

Molecular Weight (calculated)

39220.6 Da

IEP (calculated)

8.601

GRAVY (calculated)

-0.578

Length

348 amino acids

Sequence
(BLAST)

001: MEALRKQASK FKEQVAKQQQ AVIKQFSTTG YERSDSIVID EVELQRHQQL EKLYTSTRSV RDFQKDIVRA AEGLVSIGNK HIEVGTKFSE DCYRYGSENN
101: ASDEALRKAA SLYGGALRNI EKEYEDFNRI LSSQTIDPLR AMAMGGPLED ARGLAQRYSR MRHEAEILST EIARRKARVR EAPIAEHTTK LQQSEARMIE
201: HKASMAVLGK EAAAALAAVE SQQQRVTLQR LVGTAEAEKL FHLRLAAILD DVEAEMSSEK QRRESAPPII SSHKRAEKAQ YFLAEVMHNF NGTTEKELSL
301: IVGDYVVVRQ IAPNGWAEGE CRGKAGWFPA AYVERRENIP PNKVFPQV

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.