CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42945	Soybean	endoplasmic reticulum	95.79	97.99
VIT_10s0003g02590.t01	Wine grape	cytosol	74.44	76.15
PGSC0003DMT400007954	Potato	cytosol	74.16	74.79
CDY01515	Canola	cytosol, mitochondrion	73.03	74.07
AT4G18060.1	Thale cress	cytosol, mitochondrion	73.03	74.07
Bra012620.1-P	Field mustard	mitochondrion	72.47	73.5
CDX90424	Canola	mitochondrion	72.47	73.5
Solyc02g071330.2.1	Tomato	cytosol	65.17	73.19
Zm00001d008747_P001	Maize	nucleus	31.46	66.27
Zm00001d006152_P001	Maize	nucleus	27.53	66.22
GSMUA_Achr9P02630_001	Banana	mitochondrion	57.58	65.29
Os07t0508300-01	Rice	plasma membrane	63.48	64.94
EER99434	Sorghum	cytosol	61.8	63.22
Zm00001d006461_P001	Maize	mitochondrion	61.52	62.93
TraesCS2D01G231700.1	Wheat	cytosol	59.55	61.45
TraesCS2A01G226200.1	Wheat	cytosol	59.27	61.16
TraesCS2B01G249500.1	Wheat	cytosol	58.99	60.87
KRH29359	Soybean	endoplasmic reticulum	56.18	53.91
KRH24385	Soybean	endoplasmic reticulum	55.62	53.37
KRH51472	Soybean	cytosol	55.34	53.1
HORVU2Hr1G047840.1	Barley	cytosol	19.94	48.63
KRH60785	Soybean	endoplasmic reticulum	51.4	47.16
Zm00001d022555_P001	Maize	cytosol, mitochondrion	49.16	42.89
KRH39714	Soybean	cytosol	43.26	42.54
KRH76411	Soybean	cytosol	42.7	41.99
Zm00001d022556_P001	Maize	cytosol	43.54	41.55
GSMUA_Achr6P29510_001	Banana	cytosol	52.81	36.65

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:35.1	EMBL:ACUP02003299	InterPro:AH/BAR_dom_sf	ncoils:Coil
EnsemblPlantsGene:GLYMA_05G164100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1K448	InterPro:IPR001452
InterPro:IPR027267	EnsemblPlants:KRH59070	ProteinID:KRH59070	ProteinID:KRH59070.1	PFAM:PF14604	PRINTS:PR00499
PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF5	InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326
SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI00023C4944	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:35507706..35512543

Molecular Weight (calculated)

39942.3 Da

IEP (calculated)

7.023

GRAVY (calculated)

-0.595

Length

356 amino acids

Sequence
(BLAST)

001: MDALRKQASK LREQVAKQQQ AVIKQFSSSG YESSDVVVID EVEMQRHHQL EKLYRATRAG KDFQKEIVKA AETFTAIGYK HIETGTKLSE DCCKYGAENN
101: SDNILSKAAS VYGDARKHVE KEHEELNRLL STQVDFSYVV QVLDPLRQMI NGVPLEDARH LAQRYSRMRQ EAEAQREEIA RRQARVREAP TAEQVAKLHA
201: AEARMQELKA NMAVLGKEAA AALAAVEAQQ QRLTFQRLVA MVEGEKTFHL RVAAILGEIE AEMVSDRQKK ESAPPVGISE NGTEKTMYFL AEATHPFSGE
301: SEKELSFSKG DFVVVRKVSQ SGWSEGECNG KAGWFPSAYV EKRQRIPSSN MAGEVY

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.