Factsheet for GSMUA_Achr6P29510_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P02630_001	Banana	mitochondrion	39.18	64.01
GSMUA_Achr9P02620_001	Banana	cytosol	6.43	62.26
Zm00001d008747_P001	Maize	nucleus	20.27	61.54
EER99434	Sorghum	cytosol	39.18	57.76
Zm00001d006152_P001	Maize	nucleus	16.57	57.43
CDY01515	Canola	cytosol, mitochondrion	38.99	56.98
Os07t0508300-01	Rice	plasma membrane	38.6	56.9
Solyc02g071330.2.1	Tomato	cytosol	35.09	56.78
AT4G18060.1	Thale cress	cytosol, mitochondrion	38.6	56.41
Zm00001d006461_P001	Maize	mitochondrion	38.01	56.03
VIT_10s0003g02590.t01	Wine grape	cytosol	38.01	56.03
Bra012620.1-P	Field mustard	mitochondrion	38.21	55.84
CDX90424	Canola	mitochondrion	38.21	55.84
KRH42945	Soybean	endoplasmic reticulum	37.43	55.17
TraesCS2D01G231700.1	Wheat	cytosol	37.04	55.07
TraesCS2A01G226200.1	Wheat	cytosol	36.84	54.78
TraesCS2B01G249500.1	Wheat	cytosol	36.65	54.49
PGSC0003DMT400007954	Potato	cytosol	37.43	54.39
KRH59070	Soybean	cytosol	36.65	52.81
HORVU2Hr1G047840.1	Barley	cytosol	14.43	50.68
GSMUA_Achr5P19940_001	Banana	cytosol	30.41	42.05
GSMUA_Achr8P11720_001	Banana	cytosol	30.21	41.78
GSMUA_Achr11P...	Banana	cytosol	29.63	40.97
Zm00001d022555_P001	Maize	cytosol, mitochondrion	31.77	39.95
GSMUA_Achr11P...	Banana	cytosol	29.04	39.95
Zm00001d022556_P001	Maize	cytosol	27.49	37.8
GSMUA_Achr6P01240_001	Banana	cytosol	26.12	28.27

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:35.1	InterPro:AH/BAR_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr6G29510_001	EnsemblPlants:GSMUA_Achr6P29510_001	EnsemblPlants:GSMUA_Achr6T29510_001	InterPro:IPR001452	InterPro:IPR027267
UniProt:M0TB96	PFAM:PF14604	PRINTS:PR00499	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF5
InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI0002969E74

Description

src homology-3 domain protein 3, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G29510_001]

Coordinates

chr6:+:29733886..29741956

Molecular Weight (calculated)

57444.2 Da

IEP (calculated)

6.779

GRAVY (calculated)

-0.348

Length

513 amino acids

Sequence
(BLAST)

001: MKPFHGVRGD STGDRSCSRP VICLRDSNLS KSSCFQAAIF VVKPVLSRGV ALRVFDWEGS NGVAEETSKQ VEGSGRQAAA VCMWNTFVNA LGDEDDEVPV
101: NTKQYVLQLD EEGIKRNMFW RNQVFSRTCD LQCYVRVAGK LKKSVRKGAF NTILECVRVF LLYIKRSSLF DSFFFSEWQF VPPVVIKQFR ALGYQSSDAM
201: VVDEMESHQH RQIETLCKST RAGRDLQKDI IRAAEAFATI GHKHVEIGTT LSEDCCKYGG ENQASETILA KAAALYDGAL KDVEKEHEDF NTFLSSQIMD
301: PLRTMVTDDT LENAGNLAQQ YNRVRHEAET LAAEVSKRQS RVRGTSILEN TAKVQSSEAK MYELKANMTL LGKEAATALV AVESQQQRQT TQRLASLVEA
401: EKLFHLRLAA ILDDVEAEMI TEKQRKVSAL PSAPFHKRSE KTLYFLAEAI YQFSATSEKE LSLEVGDYVV VRQVSPSGWS EGECRGKAGW FPSAYVEKRD
501: DIPPNRSLSL IAS

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.