Factsheet for PGSC0003DMT400007954

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g071330.2.1	Tomato	cytosol	87.25	97.16
KRH42945	Soybean	endoplasmic reticulum	75.35	76.44
VIT_10s0003g02590.t01	Wine grape	cytosol	73.94	75.0
AT4G18060.1	Thale cress	cytosol, mitochondrion	74.5	74.93
KRH59070	Soybean	cytosol	74.79	74.16
CDY01515	Canola	cytosol, mitochondrion	73.65	74.07
CDX90424	Canola	mitochondrion	73.09	73.5
Bra012620.1-P	Field mustard	mitochondrion	73.09	73.5
GSMUA_Achr9P02630_001	Banana	mitochondrion	57.79	64.97
Zm00001d006152_P001	Maize	nucleus	26.63	63.51
Zm00001d008747_P001	Maize	nucleus	30.31	63.31
EER99434	Sorghum	cytosol	60.91	61.78
Os07t0508300-01	Rice	plasma membrane	60.91	61.78
Zm00001d006461_P001	Maize	mitochondrion	59.77	60.63
TraesCS2D01G231700.1	Wheat	cytosol	58.07	59.42
TraesCS2A01G226200.1	Wheat	cytosol	57.79	59.13
TraesCS2B01G249500.1	Wheat	cytosol	57.51	58.84
PGSC0003DMT400008049	Potato	mitochondrion	53.82	51.35
PGSC0003DMT400035686	Potato	cytosol	53.54	51.08
HORVU2Hr1G047840.1	Barley	cytosol	19.83	47.95
PGSC0003DMT400077295	Potato	cytosol	43.06	41.99
Zm00001d022555_P001	Maize	cytosol, mitochondrion	46.74	40.44
Zm00001d022556_P001	Maize	cytosol	41.64	39.41
GSMUA_Achr6P29510_001	Banana	cytosol	54.39	37.43

Protein Annotations

Gene3D:1.20.1270.60	EntrezGene:102585741	Gene3D:2.30.30.40	MapMan:35.1	InterPro:AH/BAR_dom_sf	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452	InterPro:IPR027267	UniProt:M0ZTT6
PFAM:PF14604	EnsemblPlantsGene:PGSC0003DMG400003076	PGSC:PGSC0003DMG400003076	EnsemblPlants:PGSC0003DMT400007954	PRINTS:PR00499	PFscan:PS50002
PANTHER:PTHR44109	PANTHER:PTHR44109:SF5	InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657
SUPFAM:SSF50044	UniParc:UPI000294E486	RefSeq:XP_006355580.1	SEG:seg	:	:

Description

SH3 domain-containing protein 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400003076]

Coordinates

chr2:+:30544904..30552312

Molecular Weight (calculated)

39724.3 Da

IEP (calculated)

6.441

GRAVY (calculated)

-0.542

Length

353 amino acids

Sequence
(BLAST)

001: MDALRKQASK LREQVAKQQQ AVIKQFSATG YESSDVMVID EMEMQLHHQL DKLYKSTREK RDFQREIVKA AETFTAIGYK HIETGTKLSE DCCKYGVENP
101: NDEVLAKAAS IYGDARKHAE KEVEDLNKLF FSQVLEPMRA MVAGSPLEDA RHLAQRYSKM RQEAEIQAAE VSRRQARVRE APIPENVAKL HAAETKMQEL
201: KANMTILGKE AAAALAAVES QQERLTFQRL VAMVEAEKLY HERVAVILGN IEAEIVSEKQ RKEAAPPVAT LAVNPPAHIP EKTKYFLAEA IHSFEAESEK
301: ELSLSVGDYV VVRKVTQSGW SEGECQGRAG WFPSEYVEKR QRVPTSNGAT EVY

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.