Factsheet for Zm00001d022556_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006152_P001	Maize	nucleus	37.27	93.92
Zm00001d022555_P001	Maize	cytosol, mitochondrion	89.54	81.86
Zm00001d008747_P001	Maize	nucleus	37.0	81.66
Zm00001d006461_P001	Maize	mitochondrion	61.66	66.09
EER99434	Sorghum	cytosol	59.52	63.79
Os07t0508300-01	Rice	plasma membrane	56.03	60.06
TraesCS2D01G231700.1	Wheat	cytosol	52.81	57.1
TraesCS2A01G226200.1	Wheat	cytosol	52.28	56.52
TraesCS2B01G249500.1	Wheat	cytosol	52.01	56.23
GSMUA_Achr9P02630_001	Banana	mitochondrion	45.04	53.5
Zm00001d024355_P001	Maize	cytosol	7.24	51.92
Solyc02g071330.2.1	Tomato	cytosol	39.41	46.37
HORVU2Hr1G047840.1	Barley	cytosol	17.96	45.89
VIT_10s0003g02590.t01	Wine grape	cytosol	42.09	45.11
KRH42945	Soybean	endoplasmic reticulum	40.75	43.68
KRH59070	Soybean	cytosol	41.55	43.54
AT4G18060.1	Thale cress	cytosol, mitochondrion	39.95	42.45
PGSC0003DMT400007954	Potato	cytosol	39.41	41.64
Bra012620.1-P	Field mustard	mitochondrion	38.34	40.74
CDY01515	Canola	cytosol, mitochondrion	38.34	40.74
CDX90424	Canola	mitochondrion	38.34	40.74
Zm00001d013860_P012	Maize	cytosol	31.64	31.47
Zm00001d032465_P002	Maize	cytosol	31.9	30.43
Zm00001d002810_P001	Maize	plasma membrane	28.95	29.35
GSMUA_Achr6P29510_001	Banana	cytosol	37.8	27.49
Zm00001d025955_P001	Maize	cytosol, mitochondrion	27.88	27.44
Zm00001d042379_P001	Maize	peroxisome	8.31	27.43
Zm00001d028558_P003	Maize	cytosol	24.66	23.29

Protein Annotations

Gene3D:2.30.30.40	Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1D6IP13	InterPro:AH/BAR_dom_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR027267	InterPro:NAD(P)-bd_dom_sf	InterPro:NmrA-like	ProteinID:ONM61002.1
PFAM:PF05368	PANTHER:PTHR44109	PANTHER:PTHR44109:SF5	InterPro:SH3-like_dom_sf	SUPFAM:SSF103657	SUPFAM:SSF50044
SUPFAM:SSF51735	UniParc:UPI0008458631	EnsemblPlantsGene:Zm00001d022556	EnsemblPlants:Zm00001d022556_P001	EnsemblPlants:Zm00001d022556_T001	SEG:seg

Description

SH3 domain-containing protein 3

Coordinates

chr7:-:179943007..179960744

Molecular Weight (calculated)

41037.0 Da

IEP (calculated)

9.175

GRAVY (calculated)

-0.382

Length

373 amino acids

Sequence
(BLAST)

001: MEKSRVLVVG GTGYIGRWLV RASLAQGHPT LVLLRAEIGL DIDKLQMLLS FKAQGARLVE ASLEDHAGLL AAVAHANVVV SAMSGAHIRS HNSPKGDTGR
101: ELADALARVA FQERVGVKGD VRQVDFQKDI VRAAEGLVSI GNKHIEVGTK FSEDCYRYGS ENNASDEALR KAASLYGGAL INIEKEYEDF NRILSSQTID
201: PLRAMAIGGP LEDARGLAQR YSRMRHEAEI LSTEIARRKA RVREAPIAEH TTKLQQSEAR MIEHKASMAV LGKEAAAALA AVESQQQRMS SEKQRRESAP
301: PIISSHKRAE KAQYFLAEVM HNFNGTTEKE LSLIVGDYVV VRQETGQNGR HQLYRKTHND SEILEVGRAV QQA

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.