Factsheet for Zm00001d032465_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002810_P001
Zm00001d009530_P001
Zm00001d011984_P001
Zm00001d013860_P012
Zm00001d024355_P001
Zm00001d025955_P001
Zm00001d028417_P001
Zm00001d032465_P002
Zm00001d038979_P001
Zm00001d042303_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34660.1	Zm00001d028417_P001	AT2G31260.1	24249832
AT4G34660.1	Zm00001d011984_P001	AT3G61710.1	24249832
AT4G34660.1	Zm00001d042303_P001	AT3G61710.1	24249832
AT4G34660.1	Zm00001d002810_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d013860_P012	AT4G34660.1	24249832
AT4G34660.1	Zm00001d024355_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d025955_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d032465_P002	AT4G34660.1	24249832
AT4G34660.1	Zm00001d009530_P001	AT5G11550.1	21798944
AT4G34660.1	Zm00001d038979_P001	AT5G11550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91379	Sorghum	cytosol	89.77	95.12
Zm00001d024355_P001	Maize	cytosol	12.53	94.23
Zm00001d013860_P012	Maize	cytosol	89.0	92.8
Os10t0512700-01	Rice	plasma membrane	86.44	91.35
TraesCS1B01G202500.1	Wheat	cytosol	84.4	89.43
TraesCS1D01G176200.1	Wheat	cytosol	84.14	89.16
TraesCS1A01G177700.1	Wheat	cytosol	84.14	89.16
HORVU1Hr1G047180.11	Barley	cytosol	77.24	81.18
GSMUA_Achr5P19940_001	Banana	cytosol	73.91	77.9
GSMUA_Achr11P...	Banana	cytosol	73.66	77.63
Zm00001d042379_P001	Maize	peroxisome	22.25	76.99
VIT_03s0038g00460.t01	Wine grape	cytosol	72.12	76.01
GSMUA_Achr8P11720_001	Banana	cytosol	71.87	75.74
PGSC0003DMT400008049	Potato	mitochondrion	71.61	75.68
Solyc01g110300.2.1	Tomato	nucleus	71.1	75.54
KRH51472	Soybean	cytosol	71.61	75.47
KRH29359	Soybean	endoplasmic reticulum	69.82	73.58
VIT_18s0001g13530.t01	Wine grape	cytosol	68.54	72.83
KRH24385	Soybean	endoplasmic reticulum	68.54	72.24
Zm00001d002810_P001	Maize	plasma membrane	66.24	70.38
AT4G34660.1	Thale cress	mitochondrion	65.98	70.11
Bra011550.1-P	Field mustard	mitochondrion	65.47	69.38
CDX75452	Canola	mitochondrion	65.47	69.38
CDX69077	Canola	mitochondrion	65.22	69.11
CDY17473	Canola	mitochondrion	63.94	67.93
KRH60785	Soybean	endoplasmic reticulum	67.26	67.78
CDX76295	Canola	cytosol	63.43	67.57
PGSC0003DMT400035686	Potato	cytosol	63.94	67.57
Solyc07g032110.2.1	Tomato	cytosol	63.94	67.57
Zm00001d025955_P001	Maize	cytosol, mitochondrion	64.96	67.02
Bra034642.1-P	Field mustard	cytosol	60.1	66.76
Bra010715.1-P	Field mustard	cytosol	62.66	65.68
CDY12114	Canola	cytosol	19.18	63.03
CDX90304	Canola	cytosol	62.4	57.82
CDY12115	Canola	cytosol	62.15	57.45
Zm00001d006152_P001	Maize	nucleus	18.67	49.32
Zm00001d006461_P001	Maize	mitochondrion	43.48	48.85
Zm00001d008747_P001	Maize	nucleus	20.46	47.34
Zm00001d028558_P003	Maize	cytosol	39.39	38.99
Zm00001d022556_P001	Maize	cytosol	30.43	31.9
Zm00001d022555_P001	Maize	cytosol, mitochondrion	33.25	31.86

Protein Annotations

Gene3D:1.20.1270.60	EntrezGene:100191269	Gene3D:2.30.30.40	MapMan:35.1	UniProt:A0A1D6KR14	InterPro:AH/BAR_dom_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452	InterPro:IPR027267
ProteinID:ONM05176.1	PFAM:PF14604	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF4	InterPro:SH3-like_dom_sf
InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI0008428101	EnsemblPlantsGene:Zm00001d032465
EnsemblPlants:Zm00001d032465_P002	EnsemblPlants:Zm00001d032465_T002	SEG:seg	:	:	:

Description

SH3 domain-containing protein 2

Coordinates

chr1:+:227580069..227583574

Molecular Weight (calculated)

43766.4 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.441

Length

391 amino acids

Sequence
(BLAST)

001: MEAIRKQASK LREQVARQQQ AVMKQFGGGY GADGVFADEA EAQQHSKLEK LYISTRAAKH FQRDIVRGVE GYIVTGSKQV EIGNKLCEDG KKYGTENTCT
101: SGSTLSKAAL SFAKARSMME KERGNLLKAL GTQVLPIVAF ISVTHECIEL WNMSHVAEPL RAMVMGAPLE DARHLAQRYD RMRQEAEAQA IEVSKRQMKL
201: REASGNSDMI SRLEAAESKL QELKSNMGVL GKEALAAMTA VEGQQQRLTL QRLIALVESE RNYHQKVLQI LDQLEREMVS ERQRIEGAPP PVVESSMPPP
301: PAYEEVNGIF MRNTVAELVE TVEYFLAEAI QSYRAESDTE LNLSAGDYIV VRKVSNNGWA EGECRGRAGW FPYDYIEKRE RVLASKVAQV F

Best Arabidopsis Sequence Match ( AT1G31440.1 )
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ

Arabidopsis Description

SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.