Factsheet for Zm00001d022555_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006152_P001	Maize	nucleus	36.27	100.0
Zm00001d008747_P001	Maize	nucleus	41.18	99.41
Zm00001d022556_P001	Maize	cytosol	81.86	89.54
Zm00001d006461_P001	Maize	mitochondrion	63.24	74.14
EER99434	Sorghum	cytosol	60.78	71.26
Os07t0508300-01	Rice	plasma membrane	57.35	67.24
HORVU2Hr1G047840.1	Barley	cytosol	23.04	64.38
TraesCS2D01G231700.1	Wheat	cytosol	54.41	64.35
TraesCS2A01G226200.1	Wheat	cytosol	53.92	63.77
TraesCS2B01G249500.1	Wheat	cytosol	53.68	63.48
GSMUA_Achr9P02630_001	Banana	mitochondrion	45.34	58.92
Solyc02g071330.2.1	Tomato	cytosol	40.44	52.05
Zm00001d024355_P001	Maize	cytosol	6.62	51.92
KRH59070	Soybean	cytosol	42.89	49.16
KRH42945	Soybean	endoplasmic reticulum	41.42	48.56
VIT_10s0003g02590.t01	Wine grape	cytosol	41.18	48.28
AT4G18060.1	Thale cress	cytosol, mitochondrion	40.93	47.58
PGSC0003DMT400007954	Potato	cytosol	40.44	46.74
Bra012620.1-P	Field mustard	mitochondrion	39.46	45.87
CDY01515	Canola	cytosol, mitochondrion	39.46	45.87
CDX90424	Canola	mitochondrion	39.46	45.87
Zm00001d013860_P012	Maize	cytosol	31.62	34.4
Zm00001d032465_P002	Maize	cytosol	31.86	33.25
Zm00001d002810_P001	Maize	plasma membrane	29.66	32.88
GSMUA_Achr6P29510_001	Banana	cytosol	39.95	31.77
Zm00001d025955_P001	Maize	cytosol, mitochondrion	28.68	30.87
Zm00001d042379_P001	Maize	peroxisome	7.35	26.55
Zm00001d028558_P003	Maize	cytosol	24.51	25.32

Protein Annotations

EnsemblPlants:Zm00001d022555_P001	EnsemblPlants:Zm00001d022555_T001	EnsemblPlantsGene:Zm00001d022555	Gene3D:3.40.50.720	InterPro:AH/BAR_dom_sf	InterPro:IPR027267
InterPro:NAD(P)-bd_dom_sf	InterPro:NmrA-like	PANTHER:PTHR44109	PANTHER:PTHR44109:SF5	PFAM:PF05368	ProteinID:ONM61001.1
SEG:seg	SUPFAM:SSF103657	SUPFAM:SSF51735	UniParc:UPI0008430F66	UniProt:A0A1D6IP12	MapMan:35.1

Description

SH3 domain-containing protein 3

Coordinates

chr7:-:179928928..179941974

Molecular Weight (calculated)

45153.2 Da

IEP (calculated)

9.336

GRAVY (calculated)

-0.286

Length

408 amino acids

Sequence
(BLAST)

001: MEKSRVLVVG GTGYIGRRLV RASLAQGHPT LVLLRAEIGL DIDKLQMLLS FKAQGARLVE ASLEDHAGLL AAVAHANVVV SAMSGAHIRN HNSPKGDTGR
101: DFQKDIVRAA EGLVSIGNKH IEVGTKFSED CYRYGSENNA SDEALRKAAS LYGGALINIE KEYEDFNRIL SSQVSRKYRY VLSFFHLLRF QTIDPLRAMA
201: IGGPLEDARG LAQRYSRMRH EAEILSTEIA RRKARVREAP IAEHTTKLQQ SEARMIEHKA SMAVLGKEAA AALAAVESQQ QRVTLQRLVG AAEAEKLFHL
301: RLAAILDDVE AEMSSEKQRR ESAPPIISSH KRAEKAQYFL AEVMHNFNGT TEKELSLIVG DYVVVRQVSV LLTLSAVEET GQNGRHQLYR KTHNDSEILE
401: VGRAVQQA

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.