Factsheet for Zm00001d024355_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002810_P001
Zm00001d009530_P001
Zm00001d011984_P001
Zm00001d013860_P012
Zm00001d024355_P001
Zm00001d025955_P001
Zm00001d028417_P001
Zm00001d032465_P002
Zm00001d038979_P001
Zm00001d042303_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34660.1	Zm00001d028417_P001	AT2G31260.1	24249832
AT4G34660.1	Zm00001d011984_P001	AT3G61710.1	24249832
AT4G34660.1	Zm00001d042303_P001	AT3G61710.1	24249832
AT4G34660.1	Zm00001d002810_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d013860_P012	AT4G34660.1	24249832
AT4G34660.1	Zm00001d024355_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d025955_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d032465_P002	AT4G34660.1	24249832
AT4G34660.1	Zm00001d009530_P001	AT5G11550.1	21798944
AT4G34660.1	Zm00001d038979_P001	AT5G11550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12114	Canola	cytosol	78.85	34.45
EER91379	Sorghum	cytosol	94.23	13.28
Zm00001d013860_P012	Maize	cytosol	94.23	13.07
Solyc01g110300.2.1	Tomato	nucleus	92.31	13.04
PGSC0003DMT400008049	Potato	mitochondrion	92.31	12.97
Os10t0512700-01	Rice	plasma membrane	92.31	12.97
Bra034642.1-P	Field mustard	cytosol	86.54	12.78
KRH51472	Soybean	cytosol	90.38	12.67
KRH24385	Soybean	endoplasmic reticulum	90.38	12.67
HORVU1Hr1G047180.11	Barley	cytosol	90.38	12.63
Zm00001d032465_P002	Maize	cytosol	94.23	12.53
AT4G34660.1	Thale cress	mitochondrion	88.46	12.5
TraesCS1D01G176200.1	Wheat	cytosol	88.46	12.47
CDX75452	Canola	mitochondrion	88.46	12.47
TraesCS1B01G202500.1	Wheat	cytosol	88.46	12.47
CDX69077	Canola	mitochondrion	88.46	12.47
Bra011550.1-P	Field mustard	mitochondrion	88.46	12.47
TraesCS1A01G177700.1	Wheat	cytosol	88.46	12.47
VIT_03s0038g00460.t01	Wine grape	cytosol	88.46	12.4
KRH29359	Soybean	endoplasmic reticulum	88.46	12.4
CDX76295	Canola	cytosol	86.54	12.26
CDY17473	Canola	mitochondrion	86.54	12.23
Zm00001d006152_P001	Maize	nucleus	34.62	12.16
GSMUA_Achr5P19940_001	Banana	cytosol	86.54	12.13
GSMUA_Achr11P...	Banana	cytosol	86.54	12.13
KRH60785	Soybean	endoplasmic reticulum	90.38	12.11
VIT_18s0001g13530.t01	Wine grape	cytosol	84.62	11.96
Zm00001d002810_P001	Maize	plasma membrane	84.62	11.96
GSMUA_Achr8P11720_001	Banana	cytosol	84.62	11.86
Solyc07g032110.2.1	Tomato	cytosol	82.69	11.62
Bra010715.1-P	Field mustard	cytosol	82.69	11.53
PGSC0003DMT400035686	Potato	cytosol	80.77	11.35
Zm00001d008747_P001	Maize	nucleus	34.62	10.65
CDX90304	Canola	cytosol	82.69	10.19
CDY12115	Canola	cytosol	80.77	9.93
Zm00001d025955_P001	Maize	cytosol, mitochondrion	71.15	9.76
Zm00001d006461_P001	Maize	mitochondrion	53.85	8.05
Zm00001d028558_P003	Maize	cytosol	57.69	7.59
Zm00001d022556_P001	Maize	cytosol	51.92	7.24
Zm00001d022555_P001	Maize	cytosol, mitochondrion	51.92	6.62
Zm00001d042379_P001	Maize	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d024355_P001	EnsemblPlants:Zm00001d024355_T001	EnsemblPlantsGene:Zm00001d024355	ncoils:Coil	PANTHER:PTHR44109	PANTHER:PTHR44109:SF2
ProteinID:AQK41071.1	UniParc:UPI0008429216	UniProt:A0A1D6IYX4	MapMan:35.1	:	:

Description

SH3 domain-containing protein 2

Coordinates

chr10:-:66563565..66564225

Molecular Weight (calculated)

5905.2 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.477

Length

52 amino acids

Sequence
(BLAST)

1: MMEKERGNLL KALGTQVAEP LRAMVMGAPL EDAHHLAQRY DRMRQEAEAQ VI

Best Arabidopsis Sequence Match ( AT4G34660.3 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEVLFPYH GVTDVELSLS TGEYVVVRKV TGSGWAEGEC KGKAGWFPYG
301: YIERRERVLA SKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.