Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G202500.1 | Wheat | cytosol | 89.78 | 90.51 |
| Zm00001d024355_P001 | Maize | cytosol | 12.63 | 90.38 |
| TraesCS1D01G176200.1 | Wheat | cytosol | 89.52 | 90.24 |
| TraesCS1A01G177700.1 | Wheat | cytosol | 89.52 | 90.24 |
| Os10t0512700-01 | Rice | plasma membrane | 85.48 | 85.95 |
| EER91379 | Sorghum | cytosol | 83.33 | 84.01 |
| Zm00001d013860_P012 | Maize | cytosol | 82.8 | 82.13 |
| Zm00001d032465_P002 | Maize | cytosol | 81.18 | 77.24 |
| GSMUA_Achr5P19940_001 | Banana | cytosol | 73.12 | 73.32 |
| GSMUA_Achr11P... | Banana | cytosol | 72.31 | 72.51 |
| GSMUA_Achr8P11720_001 | Banana | cytosol | 71.24 | 71.43 |
| KRH51472 | Soybean | cytosol | 69.09 | 69.27 |
| Solyc01g110300.2.1 | Tomato | nucleus | 68.01 | 68.75 |
| VIT_03s0038g00460.t01 | Wine grape | cytosol | 68.28 | 68.46 |
| PGSC0003DMT400008049 | Potato | mitochondrion | 68.01 | 68.38 |
| KRH29359 | Soybean | endoplasmic reticulum | 67.47 | 67.66 |
| VIT_18s0001g13530.t01 | Wine grape | cytosol | 66.67 | 67.39 |
| KRH24385 | Soybean | endoplasmic reticulum | 66.13 | 66.31 |
| AT4G34660.1 | Thale cress | mitochondrion | 62.63 | 63.32 |
| CDX75452 | Canola | mitochondrion | 62.1 | 62.6 |
| Bra011550.1-P | Field mustard | mitochondrion | 62.1 | 62.6 |
| CDX69077 | Canola | mitochondrion | 61.83 | 62.33 |
| PGSC0003DMT400035686 | Potato | cytosol | 61.83 | 62.16 |
| Solyc07g032110.2.1 | Tomato | cytosol | 61.56 | 61.89 |
| KRH60785 | Soybean | endoplasmic reticulum | 64.52 | 61.86 |
| CDY17473 | Canola | mitochondrion | 61.02 | 61.68 |
| CDX76295 | Canola | cytosol | 60.75 | 61.58 |
| CDY12114 | Canola | cytosol | 19.62 | 61.34 |
| Bra034642.1-P | Field mustard | cytosol | 57.26 | 60.51 |
| Bra010715.1-P | Field mustard | cytosol | 59.95 | 59.79 |
| HORVU2Hr1G092430.1 | Barley | cytosol | 65.05 | 58.45 |
| CDX90304 | Canola | cytosol | 59.95 | 52.84 |
| CDY12115 | Canola | cytosol | 59.68 | 52.48 |
| HORVU2Hr1G047840.1 | Barley | cytosol | 14.52 | 36.99 |
| HORVU4Hr1G060770.2 | Barley | cytosol | 40.05 | 35.56 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G047180.11 | EnsemblPlantsGene:HORVU1Hr1G047180 | Gene3D:1.20.1270.60 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:AH/BAR_dom_sf | InterPro:IPR027267 | InterPro:SH3-like_dom_sf | ncoils:Coil | PANTHER:PTHR44109 | PANTHER:PTHR44109:SF4 |
| SUPFAM:SSF103657 | SUPFAM:SSF50044 | UniParc:UPI000B47F870 | UniProt:A0A287FF47 | MapMan:22.5.4.1.4 | : |
Description
No Description!
Coordinates
chrchr1H:-:348209621..348213245
Molecular Weight (calculated)
42089.2 Da
IEP (calculated)
6.877
GRAVY (calculated)
-0.515
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAIRKQASK LREQVARQQQ AVLKQFGGGY ADSVFADEGE AQQHSKLEKL YISTRAAKHF QRDIVRGVEG YIVTGSKQVE LGNKLCEDGK KYGVENTCTS
101: GSTLSRAALS FAKARSLMEK ERGNLLKAFG TQVAEPLRAM VMGAPLEDAR HLAQRYDRMR QEAEAQAIEV SKRQMKLRET SGNGDMISRL EAAESKLQEL
201: KSNMGTLGKE AVAAMTAVEA QQQRLTLQRL IAMVESERSY HQRVLQILDQ LEREMVAERQ RIEGAPPPVI ENSMPPPPSY EEVNGIFMRT PTVAELVETV
301: EHFLAEVTNY YFHHNELAYY CYVCWDFLLN RYTCPSFRQA IQSYRAETET ELNLATGDYI VVRKVSNNGW AE
101: GSTLSRAALS FAKARSLMEK ERGNLLKAFG TQVAEPLRAM VMGAPLEDAR HLAQRYDRMR QEAEAQAIEV SKRQMKLRET SGNGDMISRL EAAESKLQEL
201: KSNMGTLGKE AVAAMTAVEA QQQRLTLQRL IAMVESERSY HQRVLQILDQ LEREMVAERQ RIEGAPPPVI ENSMPPPPSY EEVNGIFMRT PTVAELVETV
301: EHFLAEVTNY YFHHNELAYY CYVCWDFLLN RYTCPSFRQA IQSYRAETET ELNLATGDYI VVRKVSNNGW AE
001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ
Arabidopsis Description
SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.