Factsheet for HORVU4Hr1G060770.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G211900.1	Wheat	cytosol	78.52	86.35
TraesCS4D01G212700.1	Wheat	cytosol	78.52	85.23
TraesCS4A01G092400.1	Wheat	cytosol	78.52	85.23
OQU92866	Sorghum	cytosol	64.2	70.79
Os03t0266700-01	Rice	plasma membrane	66.35	70.56
Zm00001d028558_P003	Maize	cytosol	56.56	60.0
VIT_02s0087g00190.t01	Wine grape	cytosol	45.11	50.94
PGSC0003DMT400077295	Potato	cytosol	42.0	48.62
Solyc08g074780.2.1	Tomato	cytosol	41.53	48.07
KRH76411	Soybean	cytosol	41.05	47.51
KRH39714	Soybean	cytosol	40.81	47.24
GSMUA_Achr6P01240_001	Banana	cytosol	49.88	44.09
HORVU1Hr1G047180.11	Barley	cytosol	35.56	40.05
CDY27149	Canola	cytosol	39.86	38.57
Bra038424.1-P	Field mustard	cytosol	39.86	38.57
CDY12418	Canola	cytosol	39.38	38.11
HORVU2Hr1G092430.1	Barley	cytosol	37.47	37.92
AT1G31440.1	Thale cress	cytosol	39.62	37.81
HORVU2Hr1G047840.1	Barley	cytosol	10.98	31.51
CDY12310	Canola	nucleus	11.46	21.52

Protein Annotations

EnsemblPlants:HORVU4Hr1G060770.2	EnsemblPlantsGene:HORVU4Hr1G060770	Gene3D:1.20.1270.60	InterPro:AH/BAR_dom_sf	InterPro:IPR027267	ncoils:Coil
PANTHER:PTHR44109	PANTHER:PTHR44109:SF1	SEG:seg	SUPFAM:SSF103657	UniParc:UPI000B47A77C	UniProt:A0A287PA25
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:510061383..510070812

Molecular Weight (calculated)

46957.6 Da

IEP (calculated)

6.614

GRAVY (calculated)

-0.572

Length

419 amino acids

Sequence
(BLAST)

001: MEALKKQASK LREHVAKQQQ AVRKTFSARH NQDTSLVDEA ELECHQNLQK LYNTTRAAKH FQRTIVRGLE GFVAVSTKQM EIVKRLAEDC CKYGNSNQNL
101: GFVLERASAE FGKSHNQMEI EREKLLRVLG EQVFEPLREM IMSAPLEDAR LLTYRYQRIR QDMESQIADV VRRQLKSKES SGNTDSVKLQ HAESKLSELR
201: TTLAALGKEA TAAMEAVEAQ QQQITFDRLL AMVDAERTYH QNVADILDKL HDEMLNAKHH EESDKNDDEP SSDPSSEPKV SPKVSPTHVH SNSISEDPAL
301: TETSEPTRNG QEVHYVGEVI HPFDGQADGE LSISVGDFVV VRQGVPKRVV GGGVQGKGWL VPICVRRAEG QGPGKQGDRA WTSDCVIALF LLVPNGCCSS
401: SCFLPFPVHD MRYHLFRTA

Best Arabidopsis Sequence Match ( AT1G31440.1 )
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ

Arabidopsis Description

SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.