Factsheet for TraesCS4B01G211900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G212700.1	Wheat	cytosol	96.59	95.34
TraesCS4A01G092400.1	Wheat	cytosol	95.8	94.56
HORVU4Hr1G060770.2	Barley	cytosol	86.35	78.52
OQU92866	Sorghum	cytosol	78.22	78.42
Os03t0266700-01	Rice	plasma membrane	80.31	77.67
Zm00001d028558_P003	Maize	cytosol	68.77	66.33
VIT_02s0087g00190.t01	Wine grape	cytosol	55.38	56.87
Solyc08g074780.2.1	Tomato	cytosol	50.66	53.31
PGSC0003DMT400077295	Potato	cytosol	50.39	53.04
KRH39714	Soybean	cytosol	49.61	52.21
KRH76411	Soybean	cytosol	49.61	52.21
GSMUA_Achr6P01240_001	Banana	cytosol	60.63	48.73
TraesCS1B01G202500.1	Wheat	cytosol	45.67	47.15
TraesCS2B01G406500.2	Wheat	cytosol	44.62	45.95
CDY27149	Canola	cytosol	48.56	42.73
Bra038424.1-P	Field mustard	cytosol	48.56	42.73
CDY12418	Canola	cytosol	47.77	42.03
AT1G31440.1	Thale cress	cytosol	48.29	41.91
TraesCS2B01G249500.1	Wheat	cytosol	37.53	41.45
CDY12310	Canola	nucleus	12.6	21.52

Protein Annotations

EnsemblPlants:TraesCS4B01G211900.1	EnsemblPlantsGene:TraesCS4B01G211900	Gene3D:1.20.1270.60	Gene3D:2.30.30.40	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:AH/BAR_dom_sf	InterPro:IPR001452	InterPro:IPR027267	InterPro:SH3-like_dom_sf	InterPro:SH3_domain
ncoils:Coil	PANTHER:PTHR44109	PANTHER:PTHR44109:SF1	PFAM:PF14604	PFscan:PS50002	SEG:seg
SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4B:-:450449369..450454773

Molecular Weight (calculated)

42675.1 Da

IEP (calculated)

6.070

GRAVY (calculated)

-0.672

Length

381 amino acids

Sequence
(BLAST)

001: MEALKKQASK LREHVAKQQQ AVRKTFSARH NQDTSLVDEA ELECHQNLQK LYNTTRAAKH FQRTIVRGLE GFVAVSTKQM EIVKKLAEDC CKYGNNNQNL
101: GFVLGKASVE FGKSHSQMEI EREKLLRVLG EQVFEPLREM IMSAPLEDAR LLTYRYQRIR QDMESQIADV VRRQLKSKES SGNTDSVKLQ HAESKLSELR
201: TTLAALGKEA TAAMEAVEAQ QQQITFDRLL AMVDAERTYH QNVADILNKL HDEILNARPH EESDNNDDVP SSDPSSEPKV SPTHVHSNSI SEDPALTETS
301: EPTRNGQEVH YVGEVIHPFD GQADGELSIS VGDFVVVRQV SPNGWSEGEC KGKAGWFPSA YVEQRDKAPA SKVIEPGRLT A

Best Arabidopsis Sequence Match ( AT1G31440.1 )
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ

Arabidopsis Description

SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.