Factsheet for Solyc08g074780.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077295	Potato	cytosol	96.13	96.13
VIT_02s0087g00190.t01	Wine grape	cytosol	59.12	57.68
KRH76411	Soybean	cytosol	57.46	57.46
KRH39714	Soybean	cytosol	56.08	56.08
OQU92866	Sorghum	cytosol	53.31	50.79
TraesCS4B01G211900.1	Wheat	cytosol	53.31	50.66
TraesCS4D01G212700.1	Wheat	cytosol	53.87	50.52
TraesCS4A01G092400.1	Wheat	cytosol	53.87	50.52
Solyc01g110300.2.1	Tomato	nucleus	49.45	48.64
Os03t0266700-01	Rice	plasma membrane	52.49	48.22
Solyc07g032110.2.1	Tomato	cytosol	48.62	47.57
Bra038424.1-P	Field mustard	cytosol	55.25	46.19
CDY27149	Canola	cytosol	55.25	46.19
CDY12418	Canola	cytosol	55.25	46.19
AT1G31440.1	Thale cress	cytosol	54.14	44.65
Zm00001d028558_P003	Maize	cytosol	47.79	43.8
Solyc02g071330.2.1	Tomato	cytosol	37.57	42.9
GSMUA_Achr6P01240_001	Banana	cytosol	54.42	41.56
HORVU4Hr1G060770.2	Barley	cytosol	48.07	41.53
CDY12310	Canola	nucleus	15.47	25.11

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:35.1	InterPro:AH/BAR_dom_sf	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452	InterPro:IPR027267	UniProt:K4CMJ6	PFAM:PF14604
PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF1	InterPro:SH3-like_dom_sf	InterPro:SH3_domain	SMART:SM00326
SUPFAM:SSF103657	SUPFAM:SSF50044	EnsemblPlantsGene:Solyc08g074780.2	EnsemblPlants:Solyc08g074780.2.1	UniParc:UPI000276B2D2	SEG:seg

Description

No Description!

Coordinates

chr8:-:58916992..58930206

Molecular Weight (calculated)

40578.9 Da

IEP (calculated)

5.214

GRAVY (calculated)

-0.561

Length

362 amino acids

Sequence
(BLAST)

001: MEAIKKQATK LREQVAKQQQ AILRQLGHLG HESVMVDEAE LEIHQRLQEL YMSTRAAKHF QRDIVRGVEG YISTSKKQVE IARKLVDNCY KYGSEIQNGP
101: STLPKVAVEF GTTHAAMEDQ REIMLGVLGS QVCEPLRASI HGAPLEDARH LTHSYDRMRQ EFESQATEVI RRQSKFREAS TESLAKLKNA ETRLSELKSS
201: VLVLGKEATD AMLSVEEEQQ QITFQKLLTM VDAERSYHQN VVSILEKLHS EMLVEEQLSE SPPQSSNSPR VLHDTTSNGT EHPETEDKSP TYFIAKVMHS
301: FDAQADGELS LEVGDYVVVR QVAPNGWSEG ECNGKSGWFP SAYAVMSDEV AASKMVETDT TP

Best Arabidopsis Sequence Match ( AT4G34660.1 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.