CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12114	Canola	cytosol	11.21	21.01
CDY27149	Canola	cytosol	34.98	18.01
CDY12418	Canola	cytosol	34.08	17.55
Solyc08g074780.2.1	Tomato	cytosol	25.11	15.47
PGSC0003DMT400077295	Potato	cytosol	24.66	15.19
KRH76411	Soybean	cytosol	22.87	14.09
VIT_02s0087g00190.t01	Wine grape	cytosol	23.32	14.02
Os03t0266700-01	Rice	plasma membrane	24.22	13.71
KRH39714	Soybean	cytosol	21.97	13.54
CDY17473	Canola	mitochondrion	21.97	13.32
CDX75452	Canola	mitochondrion	21.97	13.28
CDX69077	Canola	mitochondrion	21.97	13.28
TraesCS4D01G212700.1	Wheat	cytosol	22.87	13.21
TraesCS4A01G092400.1	Wheat	cytosol	22.87	13.21
OQU92866	Sorghum	cytosol	22.42	13.16
CDX76295	Canola	cytosol	21.52	13.08
TraesCS4B01G211900.1	Wheat	cytosol	21.52	12.6
CDY12115	Canola	cytosol	23.77	12.53
CDX90304	Canola	cytosol	23.32	12.32
Zm00001d028558_P003	Maize	cytosol	20.63	11.65
HORVU4Hr1G060770.2	Barley	cytosol	21.52	11.46
CDY01515	Canola	cytosol, mitochondrion	17.49	11.11
CDX90424	Canola	mitochondrion	17.49	11.11
GSMUA_Achr6P01240_001	Banana	cytosol	18.39	8.65

Protein Annotations

EnsemblPlants:CDY12310	EnsemblPlantsGene:GSBRNA2T00061407001	InterPro:AH/BAR_dom_sf	InterPro:IPR027267	PANTHER:PTHR44109	PANTHER:PTHR44109:SF1
ProteinID:CDY12310	ProteinID:CDY12310.1	SEG:seg	SUPFAM:SSF103657	UniParc:UPI0004EE49AF	UniProt:A0A078FD53
MapMan:35.1	:	:	:	:	:

Description

BnaA09g25100DBnaA09g25100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD53]

Coordinates

chrLK032019:+:836293..839204

Molecular Weight (calculated)

25990.6 Da

IEP (calculated)

8.478

GRAVY (calculated)

-0.917

Length

223 amino acids

Sequence
(BLAST)

001: MIYSAPLEDV RHLVNHYVKL RQEFIFEQAT DKHREISQFI HQQSATKLLA KKLLRAMLEV DSQQQNESYQ RLRTLVEAER SYHRNALDIL DQLHSKMVAE
101: EEATESSPKS LPLYLEDAVS HPQEETNSNH RGEIKSIHIE DTECSHQEVT KLNSKNETKS SSPQEEYIFP LNNSKQRKSS IQQSCWCLIK QRSGGWDRLV
201: GRRIQGQSSL HTWRNKGKLL QAK

Best Arabidopsis Sequence Match ( AT1G31440.1 )
(BLAST)

001: MEAIRKQAAK LREQVARQQQ AVLKHLGHVN ADAVVVDEEE LHCHQKLQDL YSSTKAAKRL QRNIVRGLEG FIATGTKVVE IGLKFAEDFK KYGDENPDAN
101: TPLSRVAHHF GTSYKSVEGE RETLLGVLSE QVCEPIRTMI YSAPLEDARH LVNHYDRLRQ EVEAQATDVL RRRSKLKESD ISEEAYIKLK NSESRLAELK
201: SSMKTLGKEA TKAMLEVDDQ QQNVTSQRLR ALVEAERSYH RNALDILDKL HSEMIAEEEA IGSSPKSLPL HIEDSASLPQ QEPNSNSSGE IKSNPLGKIK
301: ASRREEIKSN PQEVTKPSPK DEMKSSPQEE TKSNHQKEIK SSPQEEIKKS NGSDDHHNHQ LLSQNDSYFL AKVVHPFDAQ APGELSLAVD DYVIVRQVAG
401: TGWSEGEYKG KAGWFPSAYV EKQEKAPASK IVESNSKQQ

Arabidopsis Description

SH3P1SH3 domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C865]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.