CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024355_P001	Maize	cytosol	34.45	78.85
EER91379	Sorghum	cytosol	64.71	20.87
CDY12115	Canola	cytosol	73.95	20.8
CDX75452	Canola	mitochondrion	63.87	20.6
CDX69077	Canola	mitochondrion	63.87	20.6
Zm00001d013860_P012	Maize	cytosol	64.71	20.53
KRH51472	Soybean	cytosol	63.03	20.22
CDX90304	Canola	cytosol	71.43	20.14
Os10t0512700-01	Rice	plasma membrane	62.18	20.0
KRH29359	Soybean	endoplasmic reticulum	62.18	19.95
VIT_03s0038g00460.t01	Wine grape	cytosol	62.18	19.95
KRH24385	Soybean	endoplasmic reticulum	62.18	19.95
GSMUA_Achr5P19940_001	Banana	cytosol	62.18	19.95
GSMUA_Achr11P...	Banana	cytosol	62.18	19.95
CDX76295	Canola	cytosol	61.34	19.89
CDY17473	Canola	mitochondrion	61.34	19.84
Solyc01g110300.2.1	Tomato	nucleus	61.34	19.84
PGSC0003DMT400008049	Potato	mitochondrion	61.34	19.73
HORVU1Hr1G047180.11	Barley	cytosol	61.34	19.62
TraesCS1D01G176200.1	Wheat	cytosol	60.5	19.51
TraesCS1B01G202500.1	Wheat	cytosol	60.5	19.51
TraesCS1A01G177700.1	Wheat	cytosol	60.5	19.51
GSMUA_Achr8P11720_001	Banana	cytosol	60.5	19.41
KRH60785	Soybean	endoplasmic reticulum	63.03	19.33
Zm00001d002810_P001	Maize	plasma membrane	59.66	19.29
TraesCS2D01G386200.1	Wheat	cytosol	59.66	19.19
TraesCS2B01G406500.2	Wheat	cytosol	59.66	19.19
Zm00001d032465_P002	Maize	cytosol	63.03	19.18
OQU82036	Sorghum	cytosol	58.82	19.02
TraesCS2A01G388400.1	Wheat	cytosol	58.82	18.92
Os04t0539800-01	Rice	plasma membrane	57.98	18.7
GSMUA_Achr11P...	Banana	cytosol	56.3	17.96
HORVU2Hr1G092430.1	Barley	cytosol	59.66	17.15
Zm00001d025955_P001	Maize	cytosol, mitochondrion	53.78	16.89
CDY01515	Canola	cytosol, mitochondrion	49.58	16.81
CDX90424	Canola	mitochondrion	49.58	16.81
CDY12418	Canola	cytosol	42.86	11.78
CDY27149	Canola	cytosol	42.86	11.78
CDY12310	Canola	nucleus	21.01	11.21

Protein Annotations

EnsemblPlants:CDY12114	EnsemblPlantsGene:GSBRNA2T00061099001	InterPro:AH/BAR_dom_sf	InterPro:IPR027267	ncoils:Coil	PANTHER:PTHR44109
PANTHER:PTHR44109:SF4	ProteinID:CDY12114	ProteinID:CDY12114.1	SUPFAM:SSF103657	UniParc:UPI0004EDFF07	UniProt:A0A078FGH5
MapMan:35.1	:	:	:	:	:

Description

BnaC03g60300DBnaC03g60300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGH5]

Coordinates

chrLK032017:+:627681..628318

Molecular Weight (calculated)

13625.7 Da

IEP (calculated)

9.488

GRAVY (calculated)

-0.400

Length

119 amino acids

Sequence
(BLAST)

001: MVKEHGYLLK ALGTQVAEPL RAMVMGAPLV DARHLAQRYE RIRQEAESQI CFSLNVHRLS KYQNDKLPEL VMKLESAEAK LQDLKSNMTV LSKEAVSAMT
101: AVEDQQQNQT LQRLIKLYR

Best Arabidopsis Sequence Match ( AT4G34660.3 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEVLFPYH GVTDVELSLS TGEYVVVRKV TGSGWAEGEC KGKAGWFPYG
301: YIERRERVLA SKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.