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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G177700.1
TraesCS1A01G389900.1
TraesCS1B01G202500.1
TraesCS1B01G418000.1
TraesCS1D01G176200.1
TraesCS1D01G398100.1
TraesCS2A01G388400.1
TraesCS2B01G406500.2
TraesCS2D01G386200.1
TraesCS3A01G266600.1
TraesCS3B01G300100.2
TraesCS3D01G266800.1
TraesCS4A01G079800.1
TraesCS4B01G224200.1
TraesCS4D01G224800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G34660.1 TraesCS4A01G079800.1 AT2G31260.1 24249832
AT4G34660.1 TraesCS4B01G224200.1 AT2G31260.1 24249832
AT4G34660.1 TraesCS4D01G224800.1 AT2G31260.1 24249832
AT4G34660.1 TraesCS3A01G266600.1 AT3G61710.1 24249832
AT4G34660.1 TraesCS3B01G300100.2 AT3G61710.1 24249832
AT4G34660.1 TraesCS3D01G266800.1 AT3G61710.1 24249832
AT4G34660.1 TraesCS1A01G177700.1 AT4G34660.1 24249832
AT4G34660.1 TraesCS1B01G202500.1 AT4G34660.1 24249832
AT4G34660.1 TraesCS1D01G176200.1 AT4G34660.1 24249832
AT4G34660.1 TraesCS2A01G388400.1 AT4G34660.1 24249832
AT4G34660.1 TraesCS2B01G406500.2 AT4G34660.1 24249832
AT4G34660.1 TraesCS2D01G386200.1 AT4G34660.1 24249832
AT4G34660.1 TraesCS1A01G389900.1 AT5G11550.1 21798944
AT4G34660.1 TraesCS1B01G418000.1 AT5G11550.1 21798944
AT4G34660.1 TraesCS1D01G398100.1 AT5G11550.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G176200.1 Wheat cytosol 99.73 99.73
TraesCS1A01G177700.1 Wheat cytosol 99.73 99.73
Os10t0512700-01 Rice plasma membrane 92.95 92.7
EER91379 Sorghum cytosol 91.6 91.6
Zm00001d013860_P012 Maize cytosol 91.33 89.87
HORVU1Hr1G047180.11 Barley cytosol 90.51 89.78
Zm00001d024355_P001 Maize cytosol 12.47 88.46
Zm00001d032465_P002 Maize cytosol 89.43 84.4
GSMUA_Achr5P19940_001 Banana cytosol 79.13 78.71
GSMUA_Achr11P... Banana cytosol 78.32 77.9
GSMUA_Achr8P11720_001 Banana cytosol 76.96 76.55
KRH51472 Soybean cytosol 75.88 75.47
Solyc01g110300.2.1 Tomato nucleus 74.8 75.0
VIT_03s0038g00460.t01 Wine grape cytosol 75.07 74.66
PGSC0003DMT400008049 Potato mitochondrion 74.8 74.59
KRH29359 Soybean endoplasmic reticulum 73.98 73.58
VIT_18s0001g13530.t01 Wine grape cytosol 72.36 72.55
KRH24385 Soybean endoplasmic reticulum 72.36 71.97
TraesCS2B01G406500.2 Wheat cytosol 71.27 71.08
AT4G34660.1 Thale cress mitochondrion 68.56 68.75
Bra011550.1-P Field mustard mitochondrion 68.02 68.02
CDX75452 Canola mitochondrion 68.02 68.02
KRH60785 Soybean endoplasmic reticulum 71.27 67.78
CDX69077 Canola mitochondrion 67.75 67.75
CDY17473 Canola mitochondrion 67.21 67.39
PGSC0003DMT400035686 Potato cytosol 67.21 67.03
Solyc07g032110.2.1 Tomato cytosol 67.21 67.03
CDX76295 Canola cytosol 66.4 66.76
Bra034642.1-P Field mustard cytosol 63.14 66.19
Bra010715.1-P Field mustard cytosol 65.85 65.15
CDY12114 Canola cytosol 19.51 60.5
CDX90304 Canola cytosol 65.58 57.35
CDY12115 Canola cytosol 65.31 56.97
TraesCS2B01G249500.1 Wheat cytosol 44.17 47.25
TraesCS4B01G211900.1 Wheat cytosol 47.15 45.67
Protein Annotations
EnsemblPlants:TraesCS1B01G202500.1EnsemblPlantsGene:TraesCS1B01G202500Gene3D:1.20.1270.60Gene3D:2.30.30.40GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:AH/BAR_dom_sfInterPro:IPR001452InterPro:IPR027267InterPro:SH3-like_dom_sfInterPro:SH3_domain
ncoils:CoilPANTHER:PTHR44109PANTHER:PTHR44109:SF4PFAM:PF14604PFscan:PS50002SMART:SM00326
SUPFAM:SSF103657SUPFAM:SSF50044MapMan:22.5.4.1.4:::
Description
No Description!
Coordinates
chr1B:-:363630138..363633900
Molecular Weight (calculated)
41286.3 Da
IEP (calculated)
7.552
GRAVY (calculated)
-0.519
Length
369 amino acids
Sequence
(BLAST)
001: MEAIRKQASK LREQVARQQQ AVLKQFGGGY ADSVFADEGE AQQHSKLEKL YISTRAAKHF QRDIVRGVEG YIVTGSKQVE LGNKLCEDGK KYGVENTCTS
101: GSTLSRAALS FAKARSLMEK ERANLLKAFG TQVAEPLRAM VMGAPLEDAR HLAQRYDRMR QEAEAQAIEV SKRQMKLRET SGNGDMISRL EAAESKLQEL
201: KSNMGTLGKE AVAAMTAVEA QQQRLTLQRL IAMVESERSY HQRVLQILDQ LEREMVSERQ RIEGAPPPVI ENSMPPPPAY EEVNGIFMRT PTVAELVETV
301: EHFLAEAIQS YRAESETELN LSTGDYIVVR KVSNNGWAEG ECRGKAGWFP SEFIEKRDRV LASKVAQVF
Best Arabidopsis Sequence Match ( AT4G34660.1 )
(BLAST)
001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF
Arabidopsis Description
SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.