Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G398100.1 | Wheat | cytosol, plastid | 91.46 | 93.52 |
| HORVU1Hr1G086020.1 | Barley | cytosol, plastid | 93.39 | 92.88 |
| TraesCS1B01G418000.1 | Wheat | mitochondrion, plastid | 86.78 | 87.26 |
| Zm00001d038979_P001 | Maize | plastid | 70.25 | 73.7 |
| Os05t0559350-00 | Rice | plastid | 71.63 | 72.02 |
| EES19935 | Sorghum | plastid | 71.07 | 71.07 |
| Zm00001d009530_P001 | Maize | plastid | 68.59 | 70.34 |
| GSMUA_Achr4P15230_001 | Banana | plastid | 45.18 | 53.77 |
| GSMUA_Achr7P25140_001 | Banana | plastid | 51.52 | 53.28 |
| Bra023329.1-P | Field mustard | mitochondrion | 21.76 | 46.75 |
| PGSC0003DMT400047758 | Potato | cytosol | 23.69 | 42.36 |
| VIT_04s0008g03630.t01 | Wine grape | plastid | 38.84 | 40.99 |
| CDY68531 | Canola | plastid | 33.61 | 40.13 |
| CDX69749 | Canola | plastid | 33.61 | 40.13 |
| Bra008954.1-P | Field mustard | plastid | 33.61 | 40.13 |
| CDX85708 | Canola | plastid | 33.61 | 39.61 |
| CDX91209 | Canola | plastid | 33.06 | 38.71 |
| AT5G11550.1 | Thale cress | plastid | 33.06 | 38.22 |
| KRH52713 | Soybean | mitochondrion, plastid | 32.23 | 38.11 |
| KRH62041 | Soybean | plastid | 29.75 | 37.63 |
| Solyc11g071240.1.1 | Tomato | plastid | 34.16 | 37.13 |
| CDX78430 | Canola | mitochondrion | 16.8 | 33.7 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G389900.1 | EnsemblPlantsGene:TraesCS1A01G389900 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF35 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr1A:-:557872080..557873472
Molecular Weight (calculated)
35137.4 Da
IEP (calculated)
8.515
GRAVY (calculated)
0.067
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGAHREMP AAGGGGGVGT KLKATPRALF SCGIFSTCTH PALSPTATPN NNAAAGNGGV KGGGGGGSAT PGGDASPALV EAVAASAVPS PVQWHRQKQV
101: VHGGNANGSN GAGPSSFSSS SSSSASQSFT QWRLPVHHPQ QAASSASAAG AGAASHAVAG STEEKFAAGD VVAALRAVER EMEATETSKT VPAAVVAAVV
201: AAVREPATAR LAAKVLLVML LEEGNREAAV EAGAASAGVE AVAASGPAGA TAERALAALE LLCTAAGGAA AVRREALAAP VLARAVEGMS GRGRECAIGV
301: LAAIYGGEEA AGASPPPPEV VKAVVGAMQG ECSARGRRKG AQLLRALQEG GRLGLAWDGV GGS
101: VHGGNANGSN GAGPSSFSSS SSSSASQSFT QWRLPVHHPQ QAASSASAAG AGAASHAVAG STEEKFAAGD VVAALRAVER EMEATETSKT VPAAVVAAVV
201: AAVREPATAR LAAKVLLVML LEEGNREAAV EAGAASAGVE AVAASGPAGA TAERALAALE LLCTAAGGAA AVRREALAAP VLARAVEGMS GRGRECAIGV
301: LAAIYGGEEA AGASPPPPEV VKAVVGAMQG ECSARGRRKG AQLLRALQEG GRLGLAWDGV GGS
001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.