Factsheet for Zm00001d038979_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19935	Sorghum	plastid	85.26	81.27
Zm00001d009530_P001	Maize	plastid	81.79	79.94
Os05t0559350-00	Rice	plastid	78.9	75.62
TraesCS1D01G398100.1	Wheat	cytosol, plastid	73.12	71.27
HORVU1Hr1G086020.1	Barley	cytosol, plastid	74.28	70.41
TraesCS1A01G389900.1	Wheat	plastid	73.7	70.25
TraesCS1B01G418000.1	Wheat	mitochondrion, plastid	73.12	70.08
GSMUA_Achr4P15230_001	Banana	plastid	47.98	54.43
GSMUA_Achr7P25140_001	Banana	plastid	54.34	53.56
Bra023329.1-P	Field mustard	mitochondrion	22.54	46.15
PGSC0003DMT400047758	Potato	cytosol	24.86	42.36
VIT_04s0008g03630.t01	Wine grape	plastid	41.33	41.57
CDY68531	Canola	plastid	36.13	41.12
Bra008954.1-P	Field mustard	plastid	36.13	41.12
CDX69749	Canola	plastid	36.13	41.12
CDX85708	Canola	plastid	36.13	40.58
CDX91209	Canola	plastid	35.55	39.68
AT5G11550.1	Thale cress	plastid	35.26	38.85
KRH52713	Soybean	mitochondrion, plastid	34.39	38.76
KRH62041	Soybean	plastid	32.08	38.68
Solyc11g071240.1.1	Tomato	plastid	36.42	37.72
CDX78430	Canola	mitochondrion	17.92	34.25

Protein Annotations

EnsemblPlants:Zm00001d038979_P001	EnsemblPlants:Zm00001d038979_T001	EnsemblPlantsGene:Zm00001d038979	EntrezGene:103631630	PANTHER:PTHR22849	PANTHER:PTHR22849:SF35
ProteinID:AQK88359.1	SEG:seg	UniParc:UPI0002211B8C	UniProt:A0A1D6MC86	MapMan:35.2	:

Description

ARM repeat superfamily protein

Coordinates

chr6:-:168091533..168092573

Molecular Weight (calculated)

33622.6 Da

IEP (calculated)

8.395

GRAVY (calculated)

0.058

Length

346 amino acids

Sequence
(BLAST)

001: MSRAAQTGGG GAGGAARLKA SPRALFSCGI FSTCTHPALS PTATPNNNVV PGSGGGGGSG APCAEASSAS PAVLEAAAAA AAATAPPPQR QHQHQRAAQR
101: NAGPSSSSSS SSSSASQSFT QWRLPVHHPP QASGTGGDAL LSAEEKFATG EVVAALRAVE REMEAAARPV PAGVVAGVVA AVREPATARL AAKVLLVVLL
201: EEGNRETAVE AGAASAAVEA VAASGPAGAT AERALAALEL LCTAPGGAPA VRREALAAPV LARAVEAMAG RGRECAIGVL AAVYGGAAGG EDGASSSPPP
301: PAVVKAVVAA MQGECSARGR RKGAQLLRAL QEGGRLGLAW DGIGDQ

Best Arabidopsis Sequence Match ( AT5G11550.1 )
(BLAST)

001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.