Factsheet for TraesCS1D01G398100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G389900.1	Wheat	plastid	93.52	91.46
HORVU1Hr1G086020.1	Barley	cytosol, plastid	92.39	89.86
TraesCS1B01G418000.1	Wheat	mitochondrion, plastid	89.01	87.53
Zm00001d038979_P001	Maize	plastid	71.27	73.12
Os05t0559350-00	Rice	plastid	72.39	71.19
EES19935	Sorghum	plastid	72.11	70.52
Zm00001d009530_P001	Maize	plastid	68.73	68.93
GSMUA_Achr4P15230_001	Banana	plastid	46.48	54.1
GSMUA_Achr7P25140_001	Banana	plastid	52.11	52.71
Bra023329.1-P	Field mustard	mitochondrion	22.25	46.75
PGSC0003DMT400047758	Potato	cytosol	23.94	41.87
CDY68531	Canola	plastid	34.93	40.79
CDX69749	Canola	plastid	34.93	40.79
Bra008954.1-P	Field mustard	plastid	34.93	40.79
VIT_04s0008g03630.t01	Wine grape	plastid	39.15	40.41
CDX85708	Canola	plastid	34.65	39.94
CDX91209	Canola	plastid	33.8	38.71
AT5G11550.1	Thale cress	plastid	34.08	38.53
KRH62041	Soybean	plastid	30.42	37.63
KRH52713	Soybean	mitochondrion, plastid	32.39	37.46
Solyc11g071240.1.1	Tomato	plastid	34.37	36.53
CDX78430	Canola	mitochondrion	17.46	34.25

Protein Annotations

EnsemblPlants:TraesCS1D01G398100.1

EnsemblPlantsGene:TraesCS1D01G398100

PANTHER:PTHR22849

PANTHER:PTHR22849:SF35

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr1D:-:465349616..465350683

Molecular Weight (calculated)

34089.1 Da

IEP (calculated)

8.243

GRAVY (calculated)

0.063

Length

355 amino acids

Sequence
(BLAST)

001: MPAGGGGGGA GAKIKATPRA LFSCGIFSTC THPALSPTAT PNNNGAAGNG GVKGGGGGGS ATPGGDASPA LVEAAAASAV PSPVQWHRQK QVVHGGNANG
101: SNGAGPSSSS SSSSSSASQS FTQWRLPVHH PQHAASSASA AGAGAASHAV AGSTEEKFAA GDVVAALRAV EREMEATESS KTVPPAVVAG VVAAVREPAT
201: ARLAAKVLLV MLLEEGNREA AVEAGAASAA VEAVAASGPA GATAERALAA LELLCTAAGG TAAVRREALA APVLARAVEG MSGRGRECAI GVLAAIYGGE
301: EAAGASPPPP EVVKAVVGAM QGECSARGRR KGAQLLRALQ EGGRLGLAWD GVGGS

Best Arabidopsis Sequence Match ( AT5G11550.1 )
(BLAST)

001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.