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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:mitochondrion, nucleus, plasma membrane
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038979_P001 Maize plastid 75.62 78.9
EES19935 Sorghum plastid 77.29 76.86
Zm00001d009530_P001 Maize plastid 74.24 75.71
TraesCS1D01G398100.1 Wheat cytosol, plastid 71.19 72.39
TraesCS1A01G389900.1 Wheat plastid 72.02 71.63
HORVU1Hr1G086020.1 Barley cytosol, plastid 71.75 70.96
TraesCS1B01G418000.1 Wheat mitochondrion, plastid 69.53 69.53
GSMUA_Achr4P15230_001 Banana plastid 45.98 54.43
GSMUA_Achr7P25140_001 Banana plastid 52.08 53.56
Bra023329.1-P Field mustard mitochondrion 22.44 47.93
PGSC0003DMT400047758 Potato cytosol 23.55 41.87
VIT_04s0008g03630.t01 Wine grape plastid 39.89 41.86
CDY68531 Canola plastid 34.63 41.12
CDX69749 Canola plastid 34.63 41.12
Bra008954.1-P Field mustard plastid 34.63 41.12
CDX85708 Canola plastid 34.9 40.91
CDX91209 Canola plastid 34.35 40.0
AT5G11550.1 Thale cress plastid 34.63 39.81
KRH52713 Soybean mitochondrion, plastid 32.41 38.11
KRH62041 Soybean plastid 30.19 37.98
Solyc11g071240.1.1 Tomato plastid 34.63 37.43
CDX78430 Canola mitochondrion 17.17 34.25
Protein Annotations
EnsemblPlants:Os05t0559350-00EnsemblPlantsGene:Os05g0559350EntrezGene:107276888PANTHER:PTHR22849PANTHER:PTHR22849:SF35ProteinID:BAS95303.1
RefSeq:XP_015638923.1SEG:segUniParc:UPI0001C7C7B3UniProt:A0A0P0WQ80MapMan:35.2:
Description
Similar to binding. (Os05t0559350-00)
Coordinates
chr5:-:27839324..27840565
Molecular Weight (calculated)
35079.5 Da
IEP (calculated)
7.850
GRAVY (calculated)
0.034
Length
361 amino acids
Sequence
(BLAST)
001: MSRAQPGGAA AGGGGAARLK PSPRALFSCG IFSTCTHPAL SPTATPNNNV VAGMGGAKGG SGTPCGGDAA AASPVVEAAA PAVEMSSHHQ HPQQQQQQGA
101: AVQRSVGPSS SSSSSSSSAS QSFTQWRLPV HHPPQASGSA GGGGGGGGGG GGAVMMSAEE KFAAGEVVAA LRTVEREMEA AARAVPVAVV AGVVAAVREP
201: ETARLAAKVL LVVLLEEGNR EAAVEAGAAS AAVEAVAASG PAGATAERAL AALELLCTAA GGAAAVRREP LAAPVLARAV EGMAGRGREC AIGVLAAIYG
301: RNGDEAASSP PSPPPPEVVK AVVAAMQGEC SARGRRKGAQ LLRALQEGGR LGLAWDGVGE P
Best Arabidopsis Sequence Match ( AT5G11550.1 )
(BLAST)
001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.