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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G398100.1 Wheat cytosol, plastid 87.53 89.01
TraesCS1A01G389900.1 Wheat plastid 87.26 86.78
HORVU1Hr1G086020.1 Barley cytosol, plastid 86.98 86.03
Zm00001d038979_P001 Maize plastid 70.08 73.12
Os05t0559350-00 Rice plastid 69.53 69.53
EES19935 Sorghum plastid 68.98 68.59
Zm00001d009530_P001 Maize plastid 67.04 68.36
GSMUA_Achr4P15230_001 Banana plastid 44.6 52.79
GSMUA_Achr7P25140_001 Banana plastid 51.25 52.71
Bra023329.1-P Field mustard mitochondrion 21.61 46.15
PGSC0003DMT400047758 Potato cytosol 23.55 41.87
CDX85708 Canola plastid 35.18 41.23
CDY68531 Canola plastid 34.35 40.79
CDX69749 Canola plastid 34.35 40.79
Bra008954.1-P Field mustard plastid 34.35 40.79
CDX91209 Canola plastid 34.63 40.32
VIT_04s0008g03630.t01 Wine grape plastid 37.4 39.24
AT5G11550.1 Thale cress plastid 33.8 38.85
KRH62041 Soybean plastid 29.36 36.93
Solyc11g071240.1.1 Tomato plastid 33.8 36.53
KRH52713 Soybean mitochondrion, plastid 31.02 36.48
CDX78430 Canola mitochondrion 16.9 33.7
Protein Annotations
EnsemblPlants:TraesCS1B01G418000.1EnsemblPlantsGene:TraesCS1B01G418000PANTHER:PTHR22849PANTHER:PTHR22849:SF35SEG:segMapMan:35.2
Description
No Description!
Coordinates
chr1B:-:642121894..642122979
Molecular Weight (calculated)
34787.9 Da
IEP (calculated)
8.400
GRAVY (calculated)
0.060
Length
361 amino acids
Sequence
(BLAST)
001: MSRGAHREMP AAGGGAGAKI KATPRALFSC GIFSTCTHPA LSPTATPNNN AAAGNGGVKG SGGGGGSATP GGDASPALVE AAAASAVPSP VQWHRQKQVV
101: HGGNANGSNG AGPSSSSSSS SSSASQSFTQ WRLPVHHPPH AASSASAAGA GAASHAVAGS TEKFAAGDVV AALRAVEREM EATETSKTVP PGVVAGVVAA
201: VREPATARLA AKVLLVMLLE EGNREAAVEA GAASAAVEAV AASGPAGATA ERALAALELL CTAAGGTAAV RREALAAPVL ACAVEGMSGR GRECAIGVLA
301: AIYGGEEAAG ASPPPPEVVK GVVGAMQGEC SARGRRKGAQ LLRALQEGGR LGLAWDGVGG S
Best Arabidopsis Sequence Match ( AT5G11550.1 )
(BLAST)
001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.