Factsheet for GSMUA_Achr4P15230_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P25140_001	Banana	plastid	78.03	67.81
Bra023329.1-P	Field mustard	mitochondrion	27.54	49.7
Zm00001d038979_P001	Maize	plastid	54.43	47.98
Zm00001d009530_P001	Maize	plastid	54.75	47.18
VIT_04s0008g03630.t01	Wine grape	plastid	52.79	46.8
TraesCS1D01G398100.1	Wheat	cytosol, plastid	54.1	46.48
HORVU1Hr1G086020.1	Barley	cytosol, plastid	55.41	46.3
EES19935	Sorghum	plastid	55.08	46.28
Os05t0559350-00	Rice	plastid	54.43	45.98
KRH52713	Soybean	mitochondrion, plastid	45.57	45.28
AT5G11550.1	Thale cress	plastid	46.56	45.22
TraesCS1A01G389900.1	Wheat	plastid	53.77	45.18
CDX91209	Canola	plastid	45.9	45.16
CDX85708	Canola	plastid	45.57	45.13
CDX69749	Canola	plastid	44.92	45.07
Bra008954.1-P	Field mustard	plastid	44.92	45.07
CDY68531	Canola	plastid	44.59	44.74
TraesCS1B01G418000.1	Wheat	mitochondrion, plastid	52.79	44.6
KRH62041	Soybean	plastid	41.31	43.9
PGSC0003DMT400047758	Potato	cytosol	29.18	43.84
CDX78430	Canola	mitochondrion	24.92	41.99
Solyc11g071240.1.1	Tomato	plastid	42.95	39.22

Protein Annotations

EnsemblPlants:GSMUA_Achr4P15230_001	EnsemblPlants:GSMUA_Achr4T15230_001	EnsemblPlantsGene:GSMUA_Achr4G15230_001	PANTHER:PTHR22849	PANTHER:PTHR22849:SF35	SEG:seg
UniParc:UPI000294FACF	UniProt:M0SP38	MapMan:35.2	:	:	:

Description

Conserved conserved hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G15230_001]

Coordinates

chr4:+:11484125..11485162

Molecular Weight (calculated)

31200.2 Da

IEP (calculated)

8.681

GRAVY (calculated)

-0.074

Length

305 amino acids

Sequence
(BLAST)

001: MNRSSNQNPH PKLKTQPRAL FSCGIFGNCS QSSVASDPPR PAQPGRPPPS SSSSSSSSSF TSQSFTQWRF PLHHHDQQQL PPDTERPPPA LDTCAAASFN
101: LAEVFHAAEL QFATGVSLPA LRLLERSLAP GTAPSPAPCP PKVMAGVVAA LRVPASARPA AKVLLALLLA DHNRRTAVET GAASAAIEAV VASGPAGATA
201: ERALAALELL CRVAEGAAEV RAHSATSAAL AGAVEGMAGR GRECAIGVMA AIYGGPAAGS APPEVGRAVV VAMQGECSSR GRRKGAQLLR AMQECGRLEL
301: PTDGC

Best Arabidopsis Sequence Match ( AT5G11550.1 )
(BLAST)

001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.