Factsheet for HORVU1Hr1G086020.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G389900.1	Wheat	plastid	92.88	93.39
TraesCS1D01G398100.1	Wheat	cytosol, plastid	89.86	92.39
TraesCS1B01G418000.1	Wheat	mitochondrion, plastid	86.03	86.98
Zm00001d038979_P001	Maize	plastid	70.41	74.28
EES19935	Sorghum	plastid	71.78	72.18
Os05t0559350-00	Rice	plastid	70.96	71.75
Zm00001d009530_P001	Maize	plastid	67.95	70.06
GSMUA_Achr4P15230_001	Banana	plastid	46.3	55.41
GSMUA_Achr7P25140_001	Banana	plastid	51.78	53.85
Bra023329.1-P	Field mustard	mitochondrion	21.37	46.15
PGSC0003DMT400047758	Potato	cytosol	23.29	41.87
VIT_04s0008g03630.t01	Wine grape	plastid	38.63	40.99
Bra008954.1-P	Field mustard	plastid	33.97	40.79
CDY68531	Canola	plastid	33.97	40.79
CDX69749	Canola	plastid	33.97	40.79
CDX85708	Canola	plastid	33.97	40.26
CDX91209	Canola	plastid	33.7	39.68
AT5G11550.1	Thale cress	plastid	33.7	39.17
KRH52713	Soybean	mitochondrion, plastid	32.33	38.44
KRH62041	Soybean	plastid	29.59	37.63
Solyc11g071240.1.1	Tomato	plastid	33.7	36.83
CDX78430	Canola	mitochondrion	17.53	35.36

Protein Annotations

EMBL:AK356889	EnsemblPlants:HORVU1Hr1G086020.1	EnsemblPlantsGene:HORVU1Hr1G086020	PANTHER:PTHR22849	PANTHER:PTHR22849:SF35	SEG:seg
UniParc:UPI0002005591	UniProt:F2CZ33	MapMan:35.2	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CZ33]

Coordinates

chrchr1H:+:536643095..536645181

Molecular Weight (calculated)

35295.5 Da

IEP (calculated)

7.876

GRAVY (calculated)

0.021

Length

365 amino acids

Sequence
(BLAST)

001: MSRGAHREMP AGGGGGGVGP KLKATPRALF SCGIFSTCTH PALSPTATPN NNGAAGNGGV KGGGGGGGGS ATPCGDASPA LVEAAAASAV PSPVQWHRQK
101: QVVHGGNANG SNGAGPSSSS SSSSSSASQS FTQWRLPVHH PPHAASSASA AGAGAASHAV AGSTEEKFAA GEVVAALRAV ERDMEDTETS KTVPPGVVAG
201: VVAAVREPAT ARLAAKVLLV VLLEEANREA AVEAGAASAA VEAVAASGPA GATAERALAA LELLCTAAGG TAAVRREALA APVLARAVEG MAGRGRECAI
301: GVLAAIYGSE EAADASPPPP EVVKAVVGAM QGECSARGRR KGAQLLRALQ EGGRLGLAWD GVGGS

Best Arabidopsis Sequence Match ( AT5G11550.1 )
(BLAST)

001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.