Factsheet for Zm00001d009530_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038979_P001	Maize	plastid	79.94	81.79
EES19935	Sorghum	plastid	83.62	81.54
Os05t0559350-00	Rice	plastid	75.71	74.24
TraesCS1D01G398100.1	Wheat	cytosol, plastid	68.93	68.73
TraesCS1A01G389900.1	Wheat	plastid	70.34	68.59
HORVU1Hr1G086020.1	Barley	cytosol, plastid	70.06	67.95
TraesCS1B01G418000.1	Wheat	mitochondrion, plastid	68.36	67.04
GSMUA_Achr4P15230_001	Banana	plastid	47.18	54.75
GSMUA_Achr7P25140_001	Banana	plastid	53.39	53.85
Bra023329.1-P	Field mustard	mitochondrion	22.6	47.34
VIT_04s0008g03630.t01	Wine grape	plastid	40.96	42.15
CDY68531	Canola	plastid	36.16	42.11
CDX69749	Canola	plastid	36.16	42.11
Bra008954.1-P	Field mustard	plastid	36.16	42.11
PGSC0003DMT400047758	Potato	cytosol	24.01	41.87
CDX85708	Canola	plastid	35.88	41.23
KRH52713	Soybean	mitochondrion, plastid	35.59	41.04
CDX91209	Canola	plastid	35.31	40.32
AT5G11550.1	Thale cress	plastid	35.59	40.13
KRH62041	Soybean	plastid	32.49	40.07
Solyc11g071240.1.1	Tomato	plastid	35.31	37.43
CDX78430	Canola	mitochondrion	17.8	34.81

Protein Annotations

EnsemblPlants:Zm00001d009530_P001	EnsemblPlants:Zm00001d009530_T001	EnsemblPlantsGene:Zm00001d009530	EntrezGene:103635321	PANTHER:PTHR22849	PANTHER:PTHR22849:SF35
ProteinID:AQK92051.1	SEG:seg	UniParc:UPI0004DE8419	UniProt:A0A1D6FJW3	MapMan:35.2	:

Description

ARM repeat superfamily protein

Coordinates

chr8:-:69092687..69093751

Molecular Weight (calculated)

34632.8 Da

IEP (calculated)

8.395

GRAVY (calculated)

-0.011

Length

354 amino acids

Sequence
(BLAST)

001: MSRAAQTGGA GAGGGGAARL KASPRALFSC GIFSTCTHPA LSPTATPNNN VVSGSGGGGS GTPCAEASTA LPVTVEAAAA ASSTPPPPQR QPHHQRAQRN
101: VGPSSSSSSS SSSASQSFTQ WRLPVHHPQQ SQAPASASSS GGDALLGAEE KFAAGEVVAA LRAVEREMEA AARPVPAGVV AGVVAAVREP LTAPARLAAK
201: ALLAVLLEEG NREAAVEAGA ASAAVEAVAA SGPAGATAER ALAALELLCT APGGAPAVRR EALAAPVLAR AVEGMAGRGR ECAIGVLAAI YGAGGEDDRG
301: ASSSPPPPPE VVKAVVAAMQ GECSARGRRK GAQLLRALQQ AGRLGLAWDG VGDQ

Best Arabidopsis Sequence Match ( AT5G11550.1 )
(BLAST)

001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.