Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- mitochondrion 4
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G11550.1 | CDX70521 | AT5G13810.1 | 21798944 |
| AT5G11550.1 | CDX78539 | AT5G13810.1 | 21798944 |
| AT5G11550.1 | CDY67732 | AT5G13810.1 | 21798944 |
| AT5G11550.1 | CDY70634 | AT5G13810.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G11550.1 | Thale cress | plastid | 82.87 | 47.77 |
| CDX91209 | Canola | plastid | 79.56 | 46.45 |
| CDX69749 | Canola | plastid | 77.9 | 46.38 |
| CDX85708 | Canola | plastid | 78.45 | 46.1 |
| CDY68531 | Canola | plastid | 76.8 | 45.72 |
| KRH52713 | Soybean | mitochondrion, plastid | 48.62 | 28.66 |
| VIT_04s0008g03630.t01 | Wine grape | plastid | 49.17 | 25.87 |
| KRH62041 | Soybean | plastid | 40.88 | 25.78 |
| Solyc11g071240.1.1 | Tomato | plastid | 46.96 | 25.45 |
| GSMUA_Achr4P15230_001 | Banana | plastid | 41.99 | 24.92 |
| GSMUA_Achr7P25140_001 | Banana | plastid | 47.51 | 24.5 |
| Zm00001d038979_P001 | Maize | plastid | 34.25 | 17.92 |
| Zm00001d009530_P001 | Maize | plastid | 34.81 | 17.8 |
| HORVU1Hr1G086020.1 | Barley | cytosol, plastid | 35.36 | 17.53 |
| TraesCS1D01G398100.1 | Wheat | cytosol, plastid | 34.25 | 17.46 |
| EES19935 | Sorghum | plastid | 34.81 | 17.36 |
| PGSC0003DMT400047758 | Potato | cytosol | 19.34 | 17.24 |
| Os05t0559350-00 | Rice | plastid | 34.25 | 17.17 |
| TraesCS1B01G418000.1 | Wheat | mitochondrion, plastid | 33.7 | 16.9 |
| TraesCS1A01G389900.1 | Wheat | plastid | 33.7 | 16.8 |
Protein Annotations
| EnsemblPlants:CDX78430 | EnsemblPlantsGene:GSBRNA2T00129816001 | PANTHER:PTHR22849 | PANTHER:PTHR22849:SF35 | ProteinID:CDX78430 | ProteinID:CDX78430.1 |
| SEG:seg | UniParc:UPI0004EEBE8C | MapMan:35.2 | : | : | : |
Description
BnaA03g03420D
Coordinates
chrLK031815:-:761898..762788
Molecular Weight (calculated)
19630.2 Da
IEP (calculated)
8.662
GRAVY (calculated)
-0.430
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKANQKPKS HAPPRSFFSC GFFRRCTQSV LSPTSPHQQP RLKQTTTTSS SSSSSASTSQ SFTQWRFPPS TVTPPPPPLP VTATFQETFQ IAELQLTSVS
101: ESDKLLSPQL LERVIVPDPP SHPTCPPVSG EYIAVAPAEE VARAVALGLE GECTARGRRK GTHLLKTLEE YGPLDLSQNV A
101: ESDKLLSPQL LERVIVPDPP SHPTCPPVSG EYIAVAPAEE VARAVALGLE GECTARGRRK GTHLLKTLEE YGPLDLSQNV A
001: MMKANQKPKP HAPPRPLFSC GFFRRCTQSV LSPTSPHQQQ PRRKATTTSS SSSSSSTSTS QSFTQWRFPH HLDQTPSTAP PPPHPPPPPP PLPVTTTLQE
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT
101: TFQIAELHLT SVSESDKLLA LQLLERVVVP DPPSDPTCPP GLMRGLVSCL RSNNKIVTAK YVTKILLALC LAEGNRHVAV EAGAARAVVE TAAGLEISAV
201: ERALAALELM CTTAEGAAEV RAHAMTVPAM VAVMARLAGR GREYAISILS VVYGKGGEGG DSGEEIAVAP AEEVARAVAL ALEGECTARG KRKGAQLLKT
301: LEEYGRLDLS QNGT
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYD7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.