Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G049700.1 | |
| TraesCS4B01G255000.1 | |
| TraesCS4D01G254800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G31260.1 | TraesCS4A01G049700.1 | AT1G27700.1 | 21798944 |
| AT2G31260.1 | TraesCS4B01G255000.1 | AT1G27700.1 | 21798944 |
| AT2G31260.1 | TraesCS4D01G254800.1 | AT1G27700.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G224800.1 | Wheat | plasma membrane | 97.74 | 97.52 |
| TraesCS4B01G224200.1 | Wheat | plasma membrane | 96.72 | 95.75 |
| HORVU0Hr1G008860.2 | Barley | plasma membrane | 96.05 | 95.08 |
| Os03t0248000-02 | Rice | plasma membrane | 82.37 | 80.82 |
| OQU92911 | Sorghum | plasma membrane | 80.68 | 80.41 |
| Zm00001d028417_P001 | Maize | plasma membrane | 79.32 | 76.47 |
| GSMUA_Achr10P... | Banana | mitochondrion | 37.18 | 61.15 |
| CDY10782 | Canola | plasma membrane | 33.9 | 55.35 |
| KRH19544 | Soybean | mitochondrion, plasma membrane | 51.86 | 52.88 |
| KRH32171 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 51.41 | 52.72 |
| KRH67361 | Soybean | mitochondrion | 51.53 | 52.29 |
| AT2G31260.1 | Thale cress | plasma membrane | 50.85 | 51.96 |
| Bra021714.1-P | Field mustard | plasma membrane | 50.06 | 51.69 |
| KRG95650 | Soybean | plasma membrane | 50.73 | 51.67 |
| PGSC0003DMT400080577 | Potato | mitochondrion, plasma membrane | 50.28 | 51.27 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 9.15 | 50.94 |
| GSMUA_Achr1P03240_001 | Banana | mitochondrion | 53.67 | 50.37 |
| CDY24745 | Canola | extracellular, plasma membrane | 15.25 | 49.45 |
| Solyc04g008630.2.1 | Tomato | plasma membrane | 50.06 | 49.28 |
| CDY15410 | Canola | mitochondrion, plasma membrane | 50.28 | 48.95 |
| VIT_07s0005g03100.t01 | Wine grape | mitochondrion, plasma membrane | 49.6 | 47.72 |
| CDY19070 | Canola | plasma membrane | 48.93 | 43.61 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G079800.1 | EnsemblPlantsGene:TraesCS4A01G079800 | GO:GO:0006914 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0050832 | InterPro:Autophagy-rel_prot_9 |
| PANTHER:PTHR13038 | PANTHER:PTHR13038:SF16 | PFAM:PF04109 | SEG:seg | TMHMM:TMhelix | MapMan:19.3.2.1.1 |
Description
No Description!
Coordinates
chr4A:-:81817184..81822248
Molecular Weight (calculated)
101048.0 Da
IEP (calculated)
6.667
GRAVY (calculated)
-0.202
Length
885 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSFPSKDTN SQTLFKWPWR RESPLSAQLL IDIPPEIELS DYRRLPSSGS ESPSGLLHGE GVKEEPIPDL DIFFERLYEY FCAKGLRCIV TKWIIEILNV
101: LFTVCCIGFF FLYVDWNAIG HLKCGVEALE SGEKPCDLMA AIKHNPLVPF TFPKMVTVGS MIILVTYGLI NFLKFFVQLK STLNARDFYY NSLKITDLEI
201: QTISWPRIIE KVVLLQKSKK LCVVRDLSEH DIIMRIMRKE NYLIGMVNKG IISFPIRPWL PGAGPTVKSH VHDRRNHVIL PKALEWTLNW CIFQSMFDSK
301: FCVRKDFLAS PAALKKRLVF VGIAMLILSP CLVIFPLVYL ILRHAEEIYN HPSTASSRRW SNLSRWIFRE YNEVDHFFRH RMNNSAVHSL NYLKQFPTPL
401: ISIIAKFVSF VSGGLAGALI IMGFLGESIL EGHIFGRNLF WYTIVFGTIA AISRKVVADE LQVIDPEGAM CLVVQQTHYM PKRWRGKESN ELVRKEFETL
501: FQYTIVMLLE EMASIFITPY LLIFEVPKRV DDILHFISDF TIYVDGVGDV CSLSMFDFRR HGNRNYGSPF DAPKNLRSSQ GKMEKSFLSF QSVYPSLASN
601: AEGKQFLHNL QKFKERQIRQ QAVAQYQAME ASGFVDSTGQ RDDIFHQLLP SIIRNHAEAF PPAGYNLDPL GLLDSDQRIH PYILDWYYMR HSPHLDRVEA
701: PHFDEASLEA GQNASQLARE TSEIEEDEDY YSDLYGRVQS HMGASTSSTL FRHAPTKHNG NEDSSTGNWW NQAPASSHDP QGSFLEPPAF GYHNMADKSH
801: SSHHSDDISE GSEGDLEQGD NRSSSTRSWR NPQALSKTRY MDDSYIEDGL GLHFTDERPG VAADAYDSMP AGLPVRIIPR SSDPV
101: LFTVCCIGFF FLYVDWNAIG HLKCGVEALE SGEKPCDLMA AIKHNPLVPF TFPKMVTVGS MIILVTYGLI NFLKFFVQLK STLNARDFYY NSLKITDLEI
201: QTISWPRIIE KVVLLQKSKK LCVVRDLSEH DIIMRIMRKE NYLIGMVNKG IISFPIRPWL PGAGPTVKSH VHDRRNHVIL PKALEWTLNW CIFQSMFDSK
301: FCVRKDFLAS PAALKKRLVF VGIAMLILSP CLVIFPLVYL ILRHAEEIYN HPSTASSRRW SNLSRWIFRE YNEVDHFFRH RMNNSAVHSL NYLKQFPTPL
401: ISIIAKFVSF VSGGLAGALI IMGFLGESIL EGHIFGRNLF WYTIVFGTIA AISRKVVADE LQVIDPEGAM CLVVQQTHYM PKRWRGKESN ELVRKEFETL
501: FQYTIVMLLE EMASIFITPY LLIFEVPKRV DDILHFISDF TIYVDGVGDV CSLSMFDFRR HGNRNYGSPF DAPKNLRSSQ GKMEKSFLSF QSVYPSLASN
601: AEGKQFLHNL QKFKERQIRQ QAVAQYQAME ASGFVDSTGQ RDDIFHQLLP SIIRNHAEAF PPAGYNLDPL GLLDSDQRIH PYILDWYYMR HSPHLDRVEA
701: PHFDEASLEA GQNASQLARE TSEIEEDEDY YSDLYGRVQS HMGASTSSTL FRHAPTKHNG NEDSSTGNWW NQAPASSHDP QGSFLEPPAF GYHNMADKSH
801: SSHHSDDISE GSEGDLEQGD NRSSSTRSWR NPQALSKTRY MDDSYIEDGL GLHFTDERPG VAADAYDSMP AGLPVRIIPR SSDPV
001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR
Arabidopsis Description
ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.