CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 5
plasma membrane 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH05610
KRH43091
KRH52070
KRH59237
KRH61384

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31260.1	KRH43091	AT1G16790.1	21798944
AT2G31260.1	KRH59237	AT1G16790.1	21798944
AT2G31260.1	KRH05610	AT1G27700.1	21798944
AT2G31260.1	KRH52070	AT1G27700.1	21798944
AT2G31260.1	KRH61384	AT1G27700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67361	Soybean	mitochondrion	93.1	92.78
KRH32171	Soybean	golgi, mitochondrion, nucleus, plasma membrane	76.52	77.06
KRH19544	Soybean	mitochondrion, plasma membrane	75.6	75.69
CDY10782	Canola	plasma membrane	42.58	68.27
VIT_07s0005g03100.t01	Wine grape	mitochondrion, plasma membrane	68.7	64.89
PGSC0003DMT400080577	Potato	mitochondrion, plasma membrane	64.44	64.52
AT2G31260.1	Thale cress	plasma membrane	63.98	64.2
Bra021714.1-P	Field mustard	plasma membrane	63.06	63.94
GSMUA_Achr10P...	Banana	mitochondrion	39.01	63.01
CDY24745	Canola	extracellular, plasma membrane	19.68	62.64
Solyc04g008630.2.1	Tomato	plasma membrane	64.79	62.63
CDY15410	Canola	mitochondrion, plasma membrane	62.95	60.18
CDY19070	Canola	plasma membrane	61.33	53.68
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	9.44	51.57
TraesCS4A01G079800.1	Wheat	plasma membrane	51.67	50.73
TraesCS4D01G224800.1	Wheat	plasma membrane	51.44	50.39
TraesCS4B01G224200.1	Wheat	plasma membrane	51.44	50.0
HORVU0Hr1G008860.2	Barley	plasma membrane	50.98	49.55
GSMUA_Achr1P03240_001	Banana	mitochondrion	53.51	49.31
OQU92911	Sorghum	plasma membrane	50.29	49.21
Os03t0248000-02	Rice	plasma membrane	50.29	48.45
Zm00001d028417_P001	Maize	plasma membrane	50.4	47.71
Os10t0163100-01	Rice	mitochondrion, plasma membrane	50.06	46.93
KXG38175	Sorghum	mitochondrion	49.6	46.49

Protein Annotations

MapMan:19.3.2.1.1	EntrezGene:732654	EMBL:ACUP02012125	InterPro:Autophagy-rel_prot_9	EnsemblPlantsGene:GLYMA_19G163500	GO:GO:0000407
GO:GO:0000422	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005776	GO:GO:0005794	GO:GO:0006810	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0030659	GO:GO:0031410	GO:GO:0034497	GO:GO:0044805	UniProt:I1N9P9	EnsemblPlants:KRG95650
ProteinID:KRG95650	ProteinID:KRG95650.1	PFAM:PF04109	PANTHER:PTHR13038	PANTHER:PTHR13038:SF16	TMHMM:TMhelix
UniParc:UPI000295ECAA	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:42435399..42442936

Molecular Weight (calculated)

99580.6 Da

IEP (calculated)

6.600

GRAVY (calculated)

-0.204

Length

869 amino acids

Sequence
(BLAST)

001: MFSRQRGASA FSIFKWKHPG ASSLTTALLQ EDLPEIELSD YGKIPSPGSE SPSGLLNGES LNVEPISDLD LFSERLYSYY CEKGLWCIVI KWIVELLSLG
101: FTICFSGFFL LYVDWNGLRN AKCGMDAVES GIKPCDLAKE ALHQHPLTPL TLTKSIIVGY LGIFSIYLIF CFLRFFAQLK DTLEIRHFYY NNLHVTDNEI
201: QTMPWATILE KVVLVQRSRQ LCVVKDLSAH DIVMRLMRKE NYLIGMLNKG VLAFPISQWF PGAGPTVNSS SNGTQNRVIL TKTLEWTLNW CILQSMFDRN
301: FCVRRDFVSN PKTLRKRLMV VGLAMLLVSP FLVIFMLVYL FLRHAEQFYN HPSTASSQRW SNLSRWIFRE FNEVDHLFKH RINCGVLHAS DYLKQFPSPI
401: ISIIAKFISF VSGGFAAILI IIAFLEESLL EGHVFGRNLF WYAAVFGTIT AISRAAITNE VLVLDADGAM SMVVQHTHYM PKRWRGKEST EMVHVEFETL
501: FQYTGMMLLE EMASIFLTPY LLLCIVPKRV DDILQFIADF TVNVEGVGHV CSFSAFDFQE HGNSHYGSPC NAPRSRRSSQ GKMEKSLLSF QSSYPSWEPS
601: ALGKRFLLNL RRFREETLPV HGNVHAPSPP RMWRGSPNIG DRYRFISREM LYSTRDNHLG SLWLVEANQN NHPYLLDWYY TSRSHDTNPG DVPLEEPFGS
701: HDVNLGDVHL EPFGVIKHSS REFLMAPSNL TQNESGYEEY SDEFHDGWAA SHLGTSTSAP IFRKSVIHNQ SYNELSHTTS SHWWARSDPR GGQTQTSIFE
801: PPAFNHQTYD YHDKFSDRES EDQDHEQSMY SRDDHRLSRT YTDDLGAGEF NLHFDDIYSR PPETPPASF

Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)

001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR

Arabidopsis Description

ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.