Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G049700.1 | |
| TraesCS4B01G255000.1 | |
| TraesCS4D01G254800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G31260.1 | TraesCS4A01G049700.1 | AT1G27700.1 | 21798944 |
| AT2G31260.1 | TraesCS4B01G255000.1 | AT1G27700.1 | 21798944 |
| AT2G31260.1 | TraesCS4D01G254800.1 | AT1G27700.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G079800.1 | Wheat | plasma membrane | 95.75 | 96.72 |
| TraesCS4D01G224800.1 | Wheat | plasma membrane | 95.19 | 95.94 |
| HORVU0Hr1G008860.2 | Barley | plasma membrane | 93.62 | 93.62 |
| Os03t0248000-02 | Rice | plasma membrane | 80.43 | 79.71 |
| OQU92911 | Sorghum | plasma membrane | 79.08 | 79.62 |
| Zm00001d028417_P001 | Maize | plasma membrane | 78.3 | 76.25 |
| GSMUA_Achr10P... | Banana | mitochondrion | 36.91 | 61.34 |
| CDY10782 | Canola | plasma membrane | 33.33 | 54.98 |
| KRH19544 | Soybean | mitochondrion, plasma membrane | 51.23 | 52.77 |
| KRH32171 | Soybean | golgi, mitochondrion, nucleus, plasma membrane | 50.78 | 52.61 |
| KRH67361 | Soybean | mitochondrion | 50.78 | 52.06 |
| AT2G31260.1 | Thale cress | plasma membrane | 50.22 | 51.85 |
| KRG95650 | Soybean | plasma membrane | 50.0 | 51.44 |
| Bra021714.1-P | Field mustard | plasma membrane | 49.11 | 51.23 |
| PGSC0003DMT400080577 | Potato | mitochondrion, plasma membrane | 49.66 | 51.15 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 9.06 | 50.94 |
| CDY24745 | Canola | extracellular, plasma membrane | 15.1 | 49.45 |
| GSMUA_Achr1P03240_001 | Banana | mitochondrion | 52.01 | 49.31 |
| Solyc04g008630.2.1 | Tomato | plasma membrane | 49.33 | 49.05 |
| CDY15410 | Canola | mitochondrion, plasma membrane | 49.33 | 48.51 |
| VIT_07s0005g03100.t01 | Wine grape | mitochondrion, plasma membrane | 48.99 | 47.61 |
| CDY19070 | Canola | plasma membrane | 47.99 | 43.2 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G224200.1 | EnsemblPlantsGene:TraesCS4B01G224200 | GO:GO:0006914 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0050832 | InterPro:Autophagy-rel_prot_9 |
| PANTHER:PTHR13038 | PANTHER:PTHR13038:SF16 | PFAM:PF04109 | SEG:seg | TMHMM:TMhelix | MapMan:19.3.2.1.1 |
Description
No Description!
Coordinates
chr4B:+:469011404..469016751
Molecular Weight (calculated)
101757.0 Da
IEP (calculated)
6.643
GRAVY (calculated)
-0.161
Length
894 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSFPAKDTN SQTLFKWPWR RESPLSAQLL IDIPPEIELS DYRRLPSSGS ESPSGLLHGE GVKEEPIPDL DIFFERLYEY FCAKGLRCIV TKWIIEILNV
101: LFTVCCIGFF FLYVDWNAIS HLKCGVEALE SGEKPCDLMA AIKHNPLVPF TFPKMVTVGS MIILVTYGLI NFLKFFVQLK STLNARDFYY NSLKITDLEI
201: QTISWPRIIE KVVLLQKSKK LCVVRDLSEH DIIMRIMRKE NYLIGMVNKG IISFPIRPWL PGAGPTVKSH VHDRRNHVIL PKALEWTLNW CIFQSMFDSK
301: FCVRKDFLAS PAALKKRLVF VGIAMLILSP CLVIFPLVYL ILRHAEEIYN HPSTASSRRW SNLSRWIFRE YNEVDHFFRH RMNNSAVHSL NYLKQFPTPL
401: ISIIAKFVSF VSGGLAGALI IMGFLGESIL EGHIFGRNLF WYTIVFGTIA AISRKVVADE LQVIDPEGAM CLVVQQTHYM PKRWRGKESS ELVRKEFETL
501: FQYTIVMLLE EMVSIFITPY LLIIEVPKRV DDILHFISDF TIYVDGVGDV CSLSVFDFRR HGNKNYGSPF DAPKNLRSSQ GKMEKSFLSF QSVYPSLASN
601: ADSKQFLHNL QKFKERQIRQ QAVAQYQAME ASGFVDSTGQ RDDIFHQLLP SIIRNHAEAF PPAGYNLDPL GLLDTDQRIH PYILDWYYMC HSPHSDRAEA
701: PHFDEASLEA GQSTSQLARE TSEIEEDQDY YSDLYGRVQS HMGASTSSTL FRHAPTKHNG NEDSSTGNNW WNQAPASSSD PQGSFLEPPA FGYHNMAGNS
801: HSSHHSDDMS EGSEGDLEQG DNRSSSTRSW RNPQALSKTR YMDDSYIEDG LGLHFTDERP GVAVDAYDSM PAGLVYIMPL SSPALVGWGR TILS
101: LFTVCCIGFF FLYVDWNAIS HLKCGVEALE SGEKPCDLMA AIKHNPLVPF TFPKMVTVGS MIILVTYGLI NFLKFFVQLK STLNARDFYY NSLKITDLEI
201: QTISWPRIIE KVVLLQKSKK LCVVRDLSEH DIIMRIMRKE NYLIGMVNKG IISFPIRPWL PGAGPTVKSH VHDRRNHVIL PKALEWTLNW CIFQSMFDSK
301: FCVRKDFLAS PAALKKRLVF VGIAMLILSP CLVIFPLVYL ILRHAEEIYN HPSTASSRRW SNLSRWIFRE YNEVDHFFRH RMNNSAVHSL NYLKQFPTPL
401: ISIIAKFVSF VSGGLAGALI IMGFLGESIL EGHIFGRNLF WYTIVFGTIA AISRKVVADE LQVIDPEGAM CLVVQQTHYM PKRWRGKESS ELVRKEFETL
501: FQYTIVMLLE EMVSIFITPY LLIIEVPKRV DDILHFISDF TIYVDGVGDV CSLSVFDFRR HGNKNYGSPF DAPKNLRSSQ GKMEKSFLSF QSVYPSLASN
601: ADSKQFLHNL QKFKERQIRQ QAVAQYQAME ASGFVDSTGQ RDDIFHQLLP SIIRNHAEAF PPAGYNLDPL GLLDTDQRIH PYILDWYYMC HSPHSDRAEA
701: PHFDEASLEA GQSTSQLARE TSEIEEDQDY YSDLYGRVQS HMGASTSSTL FRHAPTKHNG NEDSSTGNNW WNQAPASSSD PQGSFLEPPA FGYHNMAGNS
801: HSSHHSDDMS EGSEGDLEQG DNRSSSTRSW RNPQALSKTR YMDDSYIEDG LGLHFTDERP GVAVDAYDSM PAGLVYIMPL SSPALVGWGR TILS
001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR
Arabidopsis Description
ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.