Factsheet for GSMUA_Achr1P03240_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr4P10890_001
GSMUA_Achr5P21980_001
GSMUA_Achr6P30760_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31260.1	GSMUA_Achr5P21980_001	AT1G16790.1	21798944
AT2G31260.1	GSMUA_Achr10P...	AT1G27700.1	21798944
AT2G31260.1	GSMUA_Achr4P10890_001	AT1G27700.1	21798944
AT2G31260.1	GSMUA_Achr6P30760_001	AT1G27700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	38.07	66.73
CDY10782	Canola	plasma membrane	32.87	57.2
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	9.33	55.35
KRH32171	Soybean	golgi, mitochondrion, nucleus, plasma membrane	50.05	54.69
KRH67361	Soybean	mitochondrion	50.05	54.13
AT2G31260.1	Thale cress	plasma membrane	49.42	53.81
KRH19544	Soybean	mitochondrion, plasma membrane	49.52	53.8
TraesCS4A01G079800.1	Wheat	plasma membrane	50.37	53.67
Os03t0248000-02	Rice	plasma membrane	51.22	53.55
KRG95650	Soybean	plasma membrane	49.31	53.51
OQU92911	Sorghum	plasma membrane	50.37	53.49
TraesCS4D01G224800.1	Wheat	plasma membrane	50.27	53.44
PGSC0003DMT400080577	Potato	mitochondrion, plasma membrane	49.1	53.34
HORVU0Hr1G008860.2	Barley	plasma membrane	50.37	53.13
CDY24745	Canola	extracellular, plasma membrane	15.38	53.11
Bra021714.1-P	Field mustard	plasma membrane	48.04	52.86
TraesCS4B01G224200.1	Wheat	plasma membrane	49.31	52.01
Solyc04g008630.2.1	Tomato	plasma membrane	49.42	51.84
Os10t0163100-01	Rice	mitochondrion, plasma membrane	50.05	50.92
Zm00001d028417_P001	Maize	plasma membrane	49.52	50.87
VIT_07s0005g03100.t01	Wine grape	mitochondrion, plasma membrane	49.2	50.43
KXG38175	Sorghum	mitochondrion	48.99	49.84
CDY15410	Canola	mitochondrion, plasma membrane	48.04	49.84
CDY19070	Canola	plasma membrane	47.19	44.81

Protein Annotations

MapMan:19.3.2.1.1	InterPro:Autophagy-rel_prot_9	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006810	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0030659	GO:GO:0031410
EnsemblPlantsGene:GSMUA_Achr1G03240_001	EnsemblPlants:GSMUA_Achr1P03240_001	EnsemblPlants:GSMUA_Achr1T03240_001	UniProt:M0RWN2	PFAM:PF04109	PANTHER:PTHR13038
PANTHER:PTHR13038:SF16	TMHMM:TMhelix	UniParc:UPI000294C110	SEG:seg	:	:

Description

autophagy protein 9, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G03240_001]

Coordinates

chr1:+:2652369..2659348

Molecular Weight (calculated)

108290.0 Da

IEP (calculated)

6.947

GRAVY (calculated)

-0.151

Length

943 amino acids

Sequence
(BLAST)

001: MMFSSRKGLI AADRWKGQQR SDLPLTTKLL SDVPPEIELS DYGKLPDSGT ESPTGLLDGE NLRAETIVDL DIFFRRLYSY YCEKGLWCII TKWIVEILNV
101: IFMVLFIAFF LLYVDWDALR KAKCGIEAVE SGQKPCDLAK EVVKHQPLVP FTVTKAIIIA SMVILTLYAL LKFLKFFTQL KSTVMIRHFY YNRLNITDRD
201: IQTTPWPQVL EKVVQLQKSQ QLCVVKELSA HDVVMRIMRK ENYLIAMLNK GILAFPISSW VPGAGPAVKS RTAGRKNHLI LPKTLEWTLN WCIFESMFDS
301: NFCLQRDFLN NPSSLRKRLI YVGIGLFLIS PCLVIFMLVY LFLRHAEQFY HHPSAASSRR WSNLSKWIFR EFNEVDHLFI HRLNNSVVPA SNYLKQFPSP
401: LITIIAKFVS FVSGGFAAIL IIFAILDESL LEGQIFGRNL FWYAAVFGTV TAISRVAVTD ELQVLDPEGA MSLVIQQTHY MPKRWCGREN SDSVRTEFET
501: LFQYTGMMLL EEMASIFVTP YLLIFVVPRH VDDILQFISN FTVYVDGVGD VCSFSLFDFQ SHGNRKHGSP FDTERYKWSS QGKLEKSFLS FQSTYPCWEP
601: SRHGQQFLSG LRKFREKQMH PQTVQENPST HTSHLKSKLK DQTELTKRFF SGDEQHGNQG ISPTDHKLGS LWAISPSQKT HPYIWDWYYT DFQLNRDVNP
701: NNAITLPTEE MCPPLNKQLT EAEDDENWCP QFSDRHHSQL EGSSSRNDAI QHQSPEHHDI GRWWDRHPGP SSFVPQASFL EPPCYGQQNF DFHSDDTVWR
801: SEAQVANGVE DNSVQKNLHN MSRTTDMDDS GTDDDAFNLH FTDDNDKSFI GKTSYTPNSV PSITIPVTII PSSKDPVCAI IKVLCHGIVY ISQLKWLTLS
901: SLKMVFYVLH LPASSLPIRF FKLVIILCDN GSWVALCDIS YWH

Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)

001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR

Arabidopsis Description

ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.