CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 4
plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH05610
KRH43091
KRH52070
KRH59237
KRH61384

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31260.1	KRH43091	AT1G16790.1	21798944
AT2G31260.1	KRH59237	AT1G16790.1	21798944
AT2G31260.1	KRH05610	AT1G27700.1	21798944
AT2G31260.1	KRH52070	AT1G27700.1	21798944
AT2G31260.1	KRH61384	AT1G27700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32171	Soybean	golgi, mitochondrion, nucleus, plasma membrane	92.51	93.05
KRH67361	Soybean	mitochondrion	78.11	77.75
KRG95650	Soybean	plasma membrane	75.69	75.6
CDY10782	Canola	plasma membrane	42.51	68.08
PGSC0003DMT400080577	Potato	mitochondrion, plasma membrane	66.36	66.36
AT2G31260.1	Thale cress	plasma membrane	65.9	66.05
Bra021714.1-P	Field mustard	plasma membrane	64.29	65.11
VIT_07s0005g03100.t01	Wine grape	mitochondrion, plasma membrane	68.66	64.78
Solyc04g008630.2.1	Tomato	plasma membrane	66.59	64.29
GSMUA_Achr10P...	Banana	mitochondrion	38.71	62.45
CDY15410	Canola	mitochondrion, plasma membrane	64.29	61.39
CDY24745	Canola	extracellular, plasma membrane	19.01	60.44
CDY19070	Canola	plasma membrane	62.56	54.68
TraesCS4A01G079800.1	Wheat	plasma membrane	52.88	51.86
OQU92911	Sorghum	plasma membrane	52.65	51.46
TraesCS4D01G224800.1	Wheat	plasma membrane	52.53	51.41
TraesCS4B01G224200.1	Wheat	plasma membrane	52.77	51.23
HORVU0Hr1G008860.2	Barley	plasma membrane	52.3	50.78
Os03t0248000-02	Rice	plasma membrane	52.77	50.78
Zm00001d028417_P001	Maize	plasma membrane	52.77	49.89
GSMUA_Achr1P03240_001	Banana	mitochondrion	53.8	49.52
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	8.87	48.43
Os10t0163100-01	Rice	mitochondrion, plasma membrane	51.15	47.9
KXG38175	Sorghum	mitochondrion	50.23	47.03

Protein Annotations

EntrezGene:100809347	MapMan:19.3.2.1.1	EMBL:ACUP02008183	InterPro:Autophagy-rel_prot_9	EnsemblPlantsGene:GLYMA_13G122200	GO:GO:0000407
GO:GO:0000422	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005776	GO:GO:0005794	GO:GO:0006810	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0030659	GO:GO:0031410	GO:GO:0034497	GO:GO:0044805	UniProt:K7LZA0	ProteinID:KRH19543.1
EnsemblPlants:KRH19544	ProteinID:KRH19544	ProteinID:KRH19544.1	PFAM:PF04109	PANTHER:PTHR13038	PANTHER:PTHR13038:SF16
TMHMM:TMhelix	UniParc:UPI000233C8EE	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:23509326..23515360

Molecular Weight (calculated)

100096.0 Da

IEP (calculated)

6.554

GRAVY (calculated)

-0.216

Length

868 amino acids

Sequence
(BLAST)

001: MFNRPRGARA FNVLNWKHQG ESSVTTGLLQ DVPPEIELSD YRRIPSPGSE SPSDLLNGES LNVEPIADLD FFFERLYCYY CEKGLWCIII KWIVELLSLG
101: FTICFSGFFL LYVDWNGLRN AKCGMDAVES GRKPCDLAKE ALHEHPLTPF TLGKAIIVGY LGIFSIYWIF CFLRFFVQLK DTLDIRQFYY NDLCVTDNEI
201: QTMPWATILE KVVLVQSSRQ LCVVKDLSAH DMVMRLMRKE NYLIGMLNKG VLSFPISLWV PGAGPSVKAG TNRTRYRLIL PKTLEWTLNW CILQSMFDRN
301: FCVRRDFVSN PKTLKKRLMV VGIVMLLLSP FLVIFMLVYL FLGHAEQFYN HPSTASSRRW SNLSRWVFRE FNEVDHLFRH RINSSVLHAT NYIKQFPSPI
401: ISIIAKFISF VSGGFAAILI IIAFLEESLL EGHIFGRNLF WYAAVFGTIT AIRRASITDE LLVIDPEGAM SMVVEHTHYM PKRWRGKEST EMVRIEFETL
501: FQYSGMMLLE EMASIFLTPY LLLLVVPKRV DDILQFIADF TVDVEGVGHV CSFSVFNFQE HGNSNYGSPF NAPHSQRSSQ GKLEKSFLSF QSSYPSWEPN
601: AQGKQFLQNL RTFRDQNLAG HVSRHEFPPL RLWRGSPNMG SNGDRNRFAS REMPFSTFAT GNHLGSLWLI ESRNQNNHPY LLDWYYTSQP HDATTQRHIQ
701: ADDPFEVTEH QSPDWMPSIL VQNEQHGHEE YINEYCDERV TSHLGASTSA PIFRESLIQD QHSIDMPLTT RSHWWARSHS QSGHGQTSFF EPPDFNHQPV
801: YNYHEKFSDR GSEDHDQEQH LHWGDYHQVV SSTAHVDDLD AGKFNLLFDD VYSSTPQNST VNPSTATF

Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)

001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR

Arabidopsis Description

ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.