CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX90104
CDY03940
CDY35117
CDY40034
CDY60275
CDY67977

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31260.1	CDY35117	AT1G16790.1	21798944
AT2G31260.1	CDY40034	AT1G16790.1	21798944
AT2G31260.1	CDX90104	AT1G27700.1	21798944
AT2G31260.1	CDY03940	AT1G27700.1	21798944
AT2G31260.1	CDY60275	AT1G27700.1	21798944
AT2G31260.1	CDY67977	AT1G27700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10782	Canola	plasma membrane	52.38	26.38
GSMUA_Achr10P...	Banana	mitochondrion	49.82	25.28
AT2G31260.1	Thale cress	plasma membrane	71.79	22.63
CDY15410	Canola	mitochondrion, plasma membrane	73.26	22.0
CDY19070	Canola	plasma membrane	74.36	20.44
KRG95650	Soybean	plasma membrane	62.64	19.68
KRH67361	Soybean	mitochondrion	62.64	19.61
KRH32171	Soybean	golgi, mitochondrion, nucleus, plasma membrane	61.17	19.35
KRH19544	Soybean	mitochondrion, plasma membrane	60.44	19.01
VIT_07s0005g03100.t01	Wine grape	mitochondrion, plasma membrane	62.64	18.59
PGSC0003DMT400080577	Potato	mitochondrion, plasma membrane	57.14	17.97
Solyc04g008630.2.1	Tomato	plasma membrane	57.51	17.46
GSMUA_Achr1P03240_001	Banana	mitochondrion	53.11	15.38
OQU92911	Sorghum	plasma membrane	49.82	15.32
TraesCS4A01G079800.1	Wheat	plasma membrane	49.45	15.25
TraesCS4D01G224800.1	Wheat	plasma membrane	49.45	15.22
HORVU0Hr1G008860.2	Barley	plasma membrane	49.82	15.21
TraesCS4B01G224200.1	Wheat	plasma membrane	49.45	15.1
Os03t0248000-02	Rice	plasma membrane	49.45	14.97
Os10t0163100-01	Rice	mitochondrion, plasma membrane	49.45	14.56
Zm00001d028417_P001	Maize	plasma membrane	48.72	14.49
KXG38175	Sorghum	mitochondrion	47.99	14.13
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	1.47	2.52

Protein Annotations

MapMan:35.1	UniProt:A0A078GDW9	InterPro:Autophagy-rel_prot_9	EnsemblPlants:CDY24745	ProteinID:CDY24745	ProteinID:CDY24745.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810
GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0015031
GO:GO:0016020	GO:GO:0030659	GO:GO:0031410	EnsemblPlantsGene:GSBRNA2T00027149001	PFAM:PF04109	PANTHER:PTHR13038
PANTHER:PTHR13038:SF16	SignalP:SignalP-noTM	UniParc:UPI0004EE5D4B	:	:	:

Description

BnaC04g13500DAutophagy-related protein 9 [Source:UniProtKB/TrEMBL;Acc:A0A078GDW9]

Coordinates

chrLK032163:+:233679..234963

Molecular Weight (calculated)

31392.4 Da

IEP (calculated)

7.517

GRAVY (calculated)

0.086

Length

273 amino acids

Sequence
(BLAST)

001: MPQLTSSLSW SGLICSCILV RHFALNTLTC YLTAIELSNC GEVPSPGREN PSGLFNGESL TVQPISDLDL FFERLYSYYI DKGLWCIIRG LKNAKCGMDV
101: VESGTKPCDL VKEVIHEHPL FFAQLKDTLD SRHFYYNSLH VTDNEILTMP WETVLEKVVQ LQSSQRLCMV KDLSAHDIVM HLMRKENYLI RMVNKGLLSF
201: PISHWIPGAA PVVKSAPHGT QHHHLVLTKT LEWTLNCCIL QSMFDWYAIL PRYSLIKLYS FRLTNIYLYI LKY

Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)

001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR

Arabidopsis Description

ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.