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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 5
  • plasma membrane 2
PPI

Inferred distinct locusB in Crop

locusBlocations
EER92668

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G31260.1 EER92668 AT1G27700.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os10t0163100-01 Rice mitochondrion, plasma membrane 74.0 74.0
OQU92911 Sorghum plasma membrane 64.08 66.89
GSMUA_Achr10P... Banana mitochondrion 34.09 58.74
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 8.85 51.57
CDY10782 Canola plasma membrane 29.99 51.29
KRH32171 Soybean golgi, mitochondrion, nucleus, plasma membrane 47.14 50.64
KRH19544 Soybean mitochondrion, plasma membrane 47.03 50.23
KRG95650 Soybean plasma membrane 46.49 49.6
KRH67361 Soybean mitochondrion 46.6 49.54
PGSC0003DMT400080577 Potato mitochondrion, plasma membrane 46.17 49.31
GSMUA_Achr1P03240_001 Banana mitochondrion 49.84 48.99
Solyc04g008630.2.1 Tomato plasma membrane 47.03 48.5
Bra021714.1-P Field mustard plasma membrane 44.66 48.31
CDY24745 Canola extracellular, plasma membrane 14.13 47.99
AT2G31260.1 Thale cress plasma membrane 44.77 47.92
CDY15410 Canola mitochondrion, plasma membrane 44.98 45.87
VIT_07s0005g03100.t01 Wine grape mitochondrion, plasma membrane 44.55 44.89
CDY19070 Canola plasma membrane 43.47 40.58
Protein Annotations
MapMan:19.3.2.1.1UniProt:A0A1B6QJT1InterPro:Autophagy-rel_prot_9GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005794GO:GO:0006810GO:GO:0006914GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0015031GO:GO:0016020GO:GO:0016021GO:GO:0030659
GO:GO:0031410EnsemblPlants:KXG38175ProteinID:KXG38175ProteinID:KXG38175.1PFAM:PF04109PANTHER:PTHR13038
PANTHER:PTHR13038:SF16EnsemblPlantsGene:SORBI_3001G192000TMHMM:TMhelixUniParc:UPI0003C6655CSEG:seg:
Description
hypothetical protein
Coordinates
chr1:-:17038290..17045246
Molecular Weight (calculated)
106915.0 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.228
Length
927 amino acids
Sequence
(BLAST)
001: MMSFFLKGTN IKRLFKWPLR RESTLSTHLL AEILPEVELS DYRRLPSSYC ESPTGLLHGE YFKAELIPDL DIFFERLYEY FCAKGLRCII IKWIIEILNV
101: TFMVCAIGFF FLFVDWDALG HLKCGVEALE IGDKPCDLMS VIKNDPLVPF TYVKLITIGS MVILTTYGII NLIKFFVKLR SILNVRDFYY NSLKVTDLEI
201: QTISWPKVVE KVVLLQKSQQ LCVVKDLSEH DIIMRLMRKQ NYLIGMVNKG IIAFPVACWL PGVGPTVSSR FHGRKSYLML PKTLEWALNW CIFHSMFDSK
301: FCVRKDFLTG PSVLTKRLVF MGIAMLLLSP CLVIFPLVYM FLRHAEEFYN NPSTASSRRW SNLSRWILRE YNEVEHFFRH RMDNCTLHSL NYLKQFPTPL
401: ISIVAKFVSF VSGGLAGILL ILGFLGESIL EGHVFGRNLF WYTVVFGTIA AVSRKVVADE LQVIDPEGAM TLVVQHTHYM PKRWRGKESS EVVRKEFETL
501: FQYTITMLLE EMASIFITPY LLIFVLPKRV NDILCFISEF TIYVDGVGDV CSLSLFDLRR HGNRNYGSPL DSVKDTRSSQ GKMEKSLLSF QSTYTSWQPN
601: PDGKQFLCNL QRFKEKQIRK YTFQQTVEDS QLWSSSRGQS GNILHRLRPS DVFPGIGIVY NLNPLGLLDT DQRAYPYILD WYYTCHSERS GRDLDSYSHR
701: GEASPESGED IWLPPMSKPL TEIEEEQIWD SNLYERARSH LEASATSAFF QRTTFKRQDR EHNSTSCPWW AQASARQTDP RDRFSEPPCD SFIEPPDFAN
801: HYTSAHSSNQ HSDWALNYAH LTGSQDNFHE PPNFGNHYHS SYHSNNGLEE GNRERDQRDN SPQTMSKTSF MDDDPDLEEG QSFHFTDVPP NNDGNEDEDD
901: GNRVGSICSS MLANLHVRIV PRSSDPV
Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)
001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR
Arabidopsis Description
ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.