CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH05610
KRH43091
KRH52070
KRH59237
KRH61384

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31260.1	KRH43091	AT1G16790.1	21798944
AT2G31260.1	KRH59237	AT1G16790.1	21798944
AT2G31260.1	KRH05610	AT1G27700.1	21798944
AT2G31260.1	KRH52070	AT1G27700.1	21798944
AT2G31260.1	KRH61384	AT1G27700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95650	Soybean	plasma membrane	92.78	93.1
KRH32171	Soybean	golgi, mitochondrion, nucleus, plasma membrane	78.67	79.49
KRH19544	Soybean	mitochondrion, plasma membrane	77.75	78.11
CDY10782	Canola	plasma membrane	43.12	69.37
Bra021714.1-P	Field mustard	plasma membrane	64.56	65.69
PGSC0003DMT400080577	Potato	mitochondrion, plasma membrane	65.14	65.44
VIT_07s0005g03100.t01	Wine grape	mitochondrion, plasma membrane	69.04	65.43
AT2G31260.1	Thale cress	plasma membrane	64.91	65.36
GSMUA_Achr10P...	Banana	mitochondrion	39.22	63.57
Solyc04g008630.2.1	Tomato	plasma membrane	65.25	63.29
CDY24745	Canola	extracellular, plasma membrane	19.61	62.64
CDY15410	Canola	mitochondrion, plasma membrane	64.56	61.94
CDY19070	Canola	plasma membrane	62.84	55.19
TraesCS4A01G079800.1	Wheat	plasma membrane	52.29	51.53
TraesCS4D01G224800.1	Wheat	plasma membrane	52.29	51.41
TraesCS4B01G224200.1	Wheat	plasma membrane	52.06	50.78
HORVU0Hr1G008860.2	Barley	plasma membrane	51.72	50.45
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	9.17	50.31
GSMUA_Achr1P03240_001	Banana	mitochondrion	54.13	50.05
OQU92911	Sorghum	plasma membrane	50.8	49.89
Os03t0248000-02	Rice	plasma membrane	51.03	49.33
Zm00001d028417_P001	Maize	plasma membrane	51.15	48.58
Os10t0163100-01	Rice	mitochondrion, plasma membrane	50.57	47.57
KXG38175	Sorghum	mitochondrion	49.54	46.6

Protein Annotations

EntrezGene:100777405	MapMan:19.3.2.1.1	EMBL:ACUP02002054	InterPro:Autophagy-rel_prot_9	EnsemblPlantsGene:GLYMA_03G162100	GO:GO:0000407
GO:GO:0000422	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005776	GO:GO:0005794	GO:GO:0006810	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0030659	GO:GO:0031410	GO:GO:0034497	GO:GO:0044805	UniProt:K7KFE6	EnsemblPlants:KRH67361
ProteinID:KRH67361	ProteinID:KRH67361.1	ProteinID:KRH67362.1	ProteinID:KRH67363.1	ProteinID:KRH67364.1	ProteinID:KRH67365.1
PFAM:PF04109	PANTHER:PTHR13038	PANTHER:PTHR13038:SF16	TMHMM:TMhelix	UniParc:UPI0002336D5D	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:37703282..37710810

Molecular Weight (calculated)

100039.0 Da

IEP (calculated)

6.697

GRAVY (calculated)

-0.225

Length

872 amino acids

Sequence
(BLAST)

001: MFSRQRGASA FSIFKWKHPG ASSLTAGLLQ EDPPEIELSY YGKIPSPGSE SPSGLLNGES LNVEPIADLD LFFERLYSYY CEKGLWCIII KWIVELLSLG
101: FTICFSGFFL LYVDWNGLRN AKCGMDAVES GIKPCDLAKE ALHQHPLTPL TLTKAIIVGY LGIFSIYWIF CFLRFFAQLK DTLEIRHFYY NSLNVTDNEI
201: QTMPWTTILE KVVLVQGSRQ LCVVKDLSAH DIIMRLMRKE NYLIGMLNKG VLAFPISQWF PGAGPTGKSS SNGTQNRVIL TKTLEWTLNW CILQSMFDRN
301: FCVRRDFVSN PKTLRKRLMV VGLAMLLLSP FLVIFMLVYL FLRHAEQFYN HPSTASSRRW SNLSRWIFRE FNEVDHLFKH RINSSVLHAS DYLKQFPSPI
401: ISIIAKFISF VSGGFAAILI IIAFLEESLL EGHIFGRNLF WYAAVFGTIT AISRAAITSE VLVLDADGAM SMVVQHTHYM PKRWRGKEST EMVRVEFETL
501: FQYTGMMLLE EMASIFLTPY LLLCIVPKRV DDILQFIADF TVNIEGVGHV CSFSAFDFQE HGNSRYGSPC NAPRSQRSSQ GKMEKSLLSF QSSYPSWEPS
601: AQGKRFLLNL RRFREEKLSV HGNIHTPSHP RMWRGSPNMG SNSGDRNRFI SREMPYSTCD NHLGSLWLIE ANQNNHPYLL DWYYTSRSHD TNLGDVPLEE
701: PFGSHDVNLG DVHLEPFGAI EHRSREYLML SNLTQNESGY EEYSNEFQDG RAASHLGTSI SVPIFRESMI HDQSCNELSH TSRSHWWARS DPRGGQTQTS
801: FFEPPAFNLQ TYDYHDKFSD RGSEDQDQEQ RMYSRDDHRL SRTYTDDLGA GEFNLHFDDI YSRPPETPPA SF

Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)

001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR

Arabidopsis Description

ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.