CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX90104
CDY03940
CDY35117
CDY40034
CDY60275
CDY67977

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31260.1	CDY35117	AT1G16790.1	21798944
AT2G31260.1	CDY40034	AT1G16790.1	21798944
AT2G31260.1	CDX90104	AT1G27700.1	21798944
AT2G31260.1	CDY03940	AT1G27700.1	21798944
AT2G31260.1	CDY60275	AT1G27700.1	21798944
AT2G31260.1	CDY67977	AT1G27700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021714.1-P	Field mustard	plasma membrane	92.08	97.67
AT2G31260.1	Thale cress	plasma membrane	81.96	86.03
CDY10782	Canola	plasma membrane	50.72	85.06
CDY19070	Canola	plasma membrane	89.11	81.57
CDY24745	Canola	extracellular, plasma membrane	22.0	73.26
KRH32171	Soybean	golgi, mitochondrion, nucleus, plasma membrane	61.61	64.89
KRH67361	Soybean	mitochondrion	61.94	64.56
KRH19544	Soybean	mitochondrion, plasma membrane	61.39	64.29
KRG95650	Soybean	plasma membrane	60.18	62.95
PGSC0003DMT400080577	Potato	mitochondrion, plasma membrane	59.41	62.21
GSMUA_Achr10P...	Banana	mitochondrion	36.19	61.15
Solyc04g008630.2.1	Tomato	plasma membrane	59.63	60.29
VIT_07s0005g03100.t01	Wine grape	mitochondrion, plasma membrane	60.18	59.46
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	8.8	50.31
TraesCS4A01G079800.1	Wheat	plasma membrane	48.95	50.28
TraesCS4D01G224800.1	Wheat	plasma membrane	48.73	49.94
HORVU0Hr1G008860.2	Barley	plasma membrane	48.73	49.55
TraesCS4B01G224200.1	Wheat	plasma membrane	48.51	49.33
OQU92911	Sorghum	plasma membrane	47.74	48.87
GSMUA_Achr1P03240_001	Banana	mitochondrion	49.84	48.04
Os03t0248000-02	Rice	plasma membrane	47.63	48.0
Zm00001d028417_P001	Maize	plasma membrane	47.41	46.95
Os10t0163100-01	Rice	mitochondrion, plasma membrane	47.74	46.82
KXG38175	Sorghum	mitochondrion	45.87	44.98

Protein Annotations

MapMan:19.3.2.1.1	GO:A0A078FLU7	UniProt:A0A078FLU7	InterPro:Autophagy-rel_prot_9	EnsemblPlants:CDY15410	ProteinID:CDY15410
ProteinID:CDY15410.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006914	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0030659	GO:GO:0031410	EnsemblPlantsGene:GSBRNA2T00085721001
PFAM:PF04109	PANTHER:PTHR13038	PANTHER:PTHR13038:SF16	TMHMM:TMhelix	UniParc:UPI0004EE926B	SEG:seg

Description

BnaC04g42130DAutophagy-related protein 9 [Source:UniProtKB/TrEMBL;Acc:A0A078FLU7]

Coordinates

chrLK032054:+:675801..680703

Molecular Weight (calculated)

103639.0 Da

IEP (calculated)

6.436

GRAVY (calculated)

-0.247

Length

909 amino acids

Sequence
(BLAST)

001: MVGPGNRSRS RITELRFLSA LPFVGRSKAG NGLVVLANCQ SLRMMSGGQK PPNVFNFFKW QRGEPSSSLT TGLLDNASHE IELSNYGGVP SPGSESPSGL
101: LNGESLNVQP IADLDLFVEK LYSYYRDKGL WCIIVKWAVE LLSLGFIICF SGFFLLYVDW RGLKNAKCGM DAVESGTKPC DLVKEAIHEH PLSPFTLTTA
201: IIVGYLALFS LYWLFCFLRF FAQLKDTLDF RHFYYNSLHV TDNEILTMPW ETVLEKVVQL QSSQRLCVVK DLSAHDIIMR LMRKENYLIG ILNKGLLSFP
301: ISHWIPGAGP LVKTTPDGTQ HHLVLTKTLE WTLNWCILQS MFDCNFRVRR DFVSNPETLK KRLFVVGLAM LLLSPFLVIF MLVYLFLRHA EQFYNHPSTA
401: SSRRWSNLSR WLFREFNEVD HLFKHRINSS AEHASQYLNQ FPSPIISIIA KFVSFVSGGF AAVLIIIAFL EESLLEGHIF GRNLFWYAAV FGTITAISRA
501: AISDELLVLD PVGTMAAVVQ HTHYMPKRWR GKENKDDVRL ELETLFQYTG MMLLEEIASI FITPFLLMFV VPKRVDDILQ FIRDFTVDIE GVGNVCSFSA
601: FDFENHGNAK YGSPRNVSRE NRSSQGKMEK SFLSFQSSYP SWESDSLGKQ FLSNLRAFRD RKLQEINARH TFSPSRAWRE APIFRPGHID NNSVLYREAP
701: RNPRNHVDSM WLIDSDQRNH PYLLDWYYTS QPHNRTDHHP VERVVNELLT PNLDGVDCWP PNLGVRGGDM EASTSGQFFR DSILRHNQDG EENYGHHHPL
801: DGRSQWWGRG DGSSHNGASH PAAANSFIEP PDFINPYTAR NLLDNSWEGR SIEEEEEEEG LDWGDDARRN LSRTTFMDDD DDDVEGGIGL HFGDVYSSRP
901: HETSTSSLG

Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)

001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR

Arabidopsis Description

ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.