Factsheet for HORVU0Hr1G008860.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G069400.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31260.1	HORVU4Hr1G069400.3	AT1G27700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G079800.1	Wheat	plasma membrane	95.08	96.05
TraesCS4D01G224800.1	Wheat	plasma membrane	94.07	94.81
TraesCS4B01G224200.1	Wheat	plasma membrane	93.62	93.62
Os03t0248000-02	Rice	plasma membrane	81.77	81.04
OQU92911	Sorghum	plasma membrane	79.64	80.18
Zm00001d028417_P001	Maize	plasma membrane	78.75	76.69
GSMUA_Achr10P...	Banana	mitochondrion	36.47	60.59
CDY10782	Canola	plasma membrane	33.33	54.98
KRH32171	Soybean	golgi, mitochondrion, nucleus, plasma membrane	50.67	52.49
KRH19544	Soybean	mitochondrion, plasma membrane	50.78	52.3
AT2G31260.1	Thale cress	plasma membrane	50.22	51.85
KRH67361	Soybean	mitochondrion	50.45	51.72
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	9.17	51.57
Bra021714.1-P	Field mustard	plasma membrane	49.33	51.46
PGSC0003DMT400080577	Potato	mitochondrion, plasma membrane	49.55	51.04
KRG95650	Soybean	plasma membrane	49.55	50.98
GSMUA_Achr1P03240_001	Banana	mitochondrion	53.13	50.37
CDY24745	Canola	extracellular, plasma membrane	15.21	49.82
Solyc04g008630.2.1	Tomato	plasma membrane	49.33	49.05
CDY15410	Canola	mitochondrion, plasma membrane	49.55	48.73
VIT_07s0005g03100.t01	Wine grape	mitochondrion, plasma membrane	48.66	47.28
CDY19070	Canola	plasma membrane	48.21	43.4

Protein Annotations

MapMan:19.3.2.1.1	EMBL:AK363587	InterPro:Autophagy-rel_prot_9	UniProt:F2DI69	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006914	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0030659	GO:GO:0031410	GO:GO:0050832
EnsemblPlantsGene:HORVU0Hr1G008860	EnsemblPlants:HORVU0Hr1G008860.2	PFAM:PF04109	PANTHER:PTHR13038	PANTHER:PTHR13038:SF16	TMHMM:TMhelix
UniParc:UPI000200646D	SEG:seg	:	:	:	:

Description

Autophagy-related protein 9 [Source:UniProtKB/TrEMBL;Acc:F2DI69]

Coordinates

chrchrUn:-:53294043..53299863

Molecular Weight (calculated)

101796.0 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.204

Length

894 amino acids

Sequence
(BLAST)

001: MMSFPSKDTN SQTVFKWPWR RESPLSAQLL IDIPPEIELS DYRRLPSSGS ESPSGLLHGE GVKEEPIPDL DIFFERLYEY FCAKGLRCIV TKWIIEILNV
101: LFTVCCIGFF FLYVDWNAIG HLKCGVEALE SGEKPCDLME AIKHNPLVPF TFPKMVTVGS MVILVTYGLI NFLKFFVQLK STLNARDFYY NSLKITDLEI
201: QTISWPRIIE KVVLLQKSKK LCVVRDLSEH DIIMRIMRKE NYLIGMVNKG IISFPIRPWL PGAGPTVKSH VHDRRNHVVL PKALEWTLNW CIFQSMFDSK
301: FCVRKDFLAS PAALKKRLVF VGIAMLILSP CLVIFPLVYL ILRHAEEIYN HPSTASSRRW SNLSRWIFRE YNEVDHFFRH RMNNSAVHSL NYLKQFPTPL
401: ISIIAKFVSF VSGGLAGALI IMGFLGESIL EGHIFGRNLF WYTIVFGTIA AISRKVVADE LQVIDPEGAM CLVIQQTHYM PRRWRGKESS ELVRKEFETL
501: FQYTIVMLLE EMASIFITPY LLIFEVPKRV DDILHFISDF TIYVDGVGDV CSLSLFDFRR HGNKNYGSPF DAPKNLRSSQ GKMEKSFLSF QSVYPSLASN
601: ADGKQFLHNL QKFKERQIRQ QAVAQYQAME ASGFVDSTGQ RDDIFHQLLP SIIRNHAEAF PPAGYNLDPL GLLDTDQRIH PYILDWYYMR HSPHLDRTEA
701: PLFDEASLEA GQNSNQLARE TSELEEDENY YSDLYGRVQS HMGASTSSTL FQQASTKHDG NEDSSAGNWW NQGPASPLDP QGSFLEPPAF GYHNMAGNSH
801: SSHHSGDISE GSEGDLQQGD NRSSSTSSWR NPPRALSKTR YMDDSYIEEG LGLHFADVLR KDGDDERPGV AADAYDRTPA GLPVRIIPRS SDPV

Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)

001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR

Arabidopsis Description

ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.