Factsheet for Os03t0248000-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
golgi 1
plastid 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0207200-01
Os10t0343100-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31260.1	Os03t0207200-01	AT1G27700.1	21798944
AT2G31260.1	Os10t0343100-01	AT1G27700.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G079800.1	Wheat	plasma membrane	80.82	82.37
OQU92911	Sorghum	plasma membrane	80.71	81.98
HORVU0Hr1G008860.2	Barley	plasma membrane	81.04	81.77
TraesCS4D01G224800.1	Wheat	plasma membrane	80.04	81.4
TraesCS4B01G224200.1	Wheat	plasma membrane	79.71	80.43
Zm00001d028417_P001	Maize	plasma membrane	79.05	77.67
Os10t0163100-01	Rice	mitochondrion, plasma membrane	68.74	66.88
GSMUA_Achr10P...	Banana	mitochondrion	36.59	61.34
CDY10782	Canola	plasma membrane	32.59	54.24
KRH19544	Soybean	mitochondrion, plasma membrane	50.78	52.77
KRH32171	Soybean	golgi, mitochondrion, nucleus, plasma membrane	50.44	52.72
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	9.2	52.2
PGSC0003DMT400080577	Potato	mitochondrion, plasma membrane	49.56	51.5
GSMUA_Achr1P03240_001	Banana	mitochondrion	53.55	51.22
KRH67361	Soybean	mitochondrion	49.33	51.03
AT2G31260.1	Thale cress	plasma membrane	48.67	50.69
Bra021714.1-P	Field mustard	plasma membrane	47.78	50.29
KRG95650	Soybean	plasma membrane	48.45	50.29
Solyc04g008630.2.1	Tomato	plasma membrane	49.78	49.94
CDY24745	Canola	extracellular, plasma membrane	14.97	49.45
CDY15410	Canola	mitochondrion, plasma membrane	48.0	47.63
VIT_07s0005g03100.t01	Wine grape	mitochondrion, plasma membrane	48.23	47.28
CDY19070	Canola	plasma membrane	46.45	42.2

Protein Annotations

MapMan:19.3.2.1.1	EntrezGene:4332250	ProteinID:ABF94961.1	InterPro:Autophagy-rel_prot_9	ProteinID:BAF11467.1	ProteinID:BAS83262.1
GO:GO:0000407	GO:GO:0000422	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005776	GO:GO:0005794	GO:GO:0006810	GO:GO:0006914	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0030659	GO:GO:0031410	GO:GO:0034497	GO:GO:0044805	EnsemblPlantsGene:Os03g0248000
EnsemblPlants:Os03t0248000-02	PFAM:PF04109	PANTHER:PTHR13038	PANTHER:PTHR13038:SF16	UniProt:Q10P42	TMHMM:TMhelix
UniParc:UPI0000DB4566	RefSeq:XP_015631796.1	SEG:seg	:	:	:

Description

AUTOPHAGY ASSOCIATED GENE 9AAutophagy protein 9 domain containing protein. (Os03t0248000-02);Similar to Autophagy protein 9. (Os03t0248000-03)

Coordinates

chr3:-:7819901..7827315

Molecular Weight (calculated)

103669.0 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.231

Length

902 amino acids

Sequence
(BLAST)

001: MMSFRSKDRN VQPRFNWPWR SESPLSAQLL IDIPPEIELS DYRRLPGSGS ESPSGLLHGE GFKDEPIADL DIFFERLYEY FCAKGLRCIV TKWIIEMLNV
101: LFMVCCIGFF FLIVDWNALG HLKCGVEALE SGEKPCDLMQ VVKHNPLVPF TFPKMITIGS MVILTTYGLI NFLKFFVQLR STLNIRDFYC NSLKITDLEI
201: QTISWPKIIE KVVLLQKSQK LCVVRDLSEH DIIMRIMRKE NYLIGMVNKG IISFPIRPWV PGAGPTVKSH LQNRRNHLIL PKALEWTLNW CIFQSMFDSK
301: FCVRKDFLTS PAVLKKRLVF VGISMLILSP CLVIFPLVYL ILRHAEEIYN HPSTASSRRW SNLSRWIFRE YNEVDHFFRH RMNNSAVHSL NYLKQFPTPL
401: ISIMAKFISF VSGGLAGALI IIGFLGESVL EGHIFGRNLF WYTIVFGTIA AISRKVVADE LQVIDPEGAM CNVVQQTHYM PKRWRGKEDS EVVRREFETL
501: FQFTIVMLLE EMASIFISPY LLIFEVPKRV DDILRFISDF TIYVDGVGDV CSLSLFDFRR HGNRNYASPF DALKTLRSSQ GKMEKSFLSF QSVYPSWEPN
601: AEGKQFLTNL QKFKEKQIRQ QALAQYQAME ASGFVASTRG HRDDIFHQLL PSDIHNRAEA ISPAVYNLGP LGLLDTDQRS HPYILDWYYV CHPPHLDRTE
701: APYFNEVFPE TSENTGSAAF KASEIEEARG WDSDMVPPPR ADRDEWNFNH ERVRSHMDAS TSSNLFHHAP VEHHDTKGNI IDWWDQAPEH STGQQGSFLE
801: PPEFGNRYVA GNRSSYHSGD VSDGSVEELE RSYNRSSSSW RRPQDLSTTR YMDDSDIEEG LNLPFADLPQ KDEDARHGTS DTNDPTPVGL PVRIIPRSSD
901: PV

Best Arabidopsis Sequence Match ( AT2G31260.1 )
(BLAST)

001: MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS
101: LGFIICFSGF FLLYVDWNGL QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ LKDTLDFRHF YYNNLHVTDN
201: EILTMPWATV LEKVVQLQSS QCLCVVKDLS AHDMVMRLMR KENYLIGMLN KGLLSFPISH WIPGAGPAVK SAPDGTQYHL VLTKTLEWTL NWCILQSMFD
301: CNFRVRRDFV SNPTTLKKRL FVVGLAMLLL SPFLVIFMLV YLFLRHAEQF YNHPSTASSR RWSNLSKWLF REFNEVDHLF KHRINSSVVH ASEYLKQFPS
401: PIISIIAKFV SFVSGGFAAV LIIIAFLEES LLEGHIFGRN LFWYAAVFGT ITAISRAAIS DELLVLDPVG TMSLVVQNTH YMPKRWRGKE NKDDVRLELE
501: TLFQYTGMML LEEIASIFIT PFLLMFVVPK RVDDILQFIK DFTVDIEGVG HVCSFSAFYF ENHGNIKYGS PHNATRREQR SSQGKMEKSF LSFQSSYPSW
601: ESDSLGKQFL SNLRTFRDRK LHEINTRHSS PSRAWRESTN TPALYRDIPR NPLASGNHTD SMWLIDPDQR NHPYLLDWYY TSQAHNRTDH PIERANEILT
701: ANQNATDCWP PDLGIRGEDS RDLLNMEAST SGQFFRESIL RHDQPEGEDS YGSQHPLDGR NQWWGRGNHS QISTAHPATT NSFIEPPDFI NRYTAGNLLD
801: NSWSRRSIEE EDEEEEELDW EENARRNLSR TTFMDDNDIE AGIDLHFDDV YSSRPQETST SSTTLR

Arabidopsis Description

ATG9Autophagy-related protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8RUS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.