Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0054g00710.t01 | Wine grape | cytosol, plastid | 48.61 | 52.24 |
| KRH43091 | Soybean | cytosol, nucleus, plastid | 40.97 | 42.45 |
| KRH59237 | Soybean | cytosol | 40.28 | 41.73 |
| AT1G16790.1 | Thale cress | cytosol | 39.58 | 39.58 |
| Bra026026.1-P | Field mustard | cytosol | 37.5 | 35.76 |
| CDY35117 | Canola | cytosol | 37.5 | 35.76 |
| PGSC0003DMT400011859 | Potato | nucleus | 37.5 | 34.62 |
| Solyc12g099960.1.1 | Tomato | cytosol | 37.5 | 34.62 |
| CDY40034 | Canola | cytosol | 36.11 | 34.44 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P21980_001 | EnsemblPlants:GSMUA_Achr5T21980_001 | EnsemblPlantsGene:GSMUA_Achr5G21980_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009941 |
| GO:GO:0016020 | ncoils:Coil | SEG:seg | UniParc:UPI000296951B | UniProt:M0T0M3 | MapMan:35.2 |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G21980_001]
Coordinates
chr5:-:24128246..24128680
Molecular Weight (calculated)
14771.5 Da
IEP (calculated)
10.097
GRAVY (calculated)
-0.312
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQPSAPNAA ATGGNEGADA KKRPPGPEEI LAHYESQGLG PREAALRAVG DLQSLLYTSL ASGRGRKDRF MSDTLRKLDN ANARLVILES KLDSKPGLGQ
101: TLAVGLASGG LLRGAGAALP HVLGGLRGIW DSVSATTRSS PSAS
101: TLAVGLASGG LLRGAGAALP HVLGGLRGIW DSVSATTRSS PSAS
001: MKQPATPNAA EETKSEQKQK SKKFPTPTEL ISHYQKRGLE PAEASIKVIE DLQNALVRVV SSSRNASSKD KLVTDARKID AINGRLAVVD AKLETKPGYV
101: ETFALGLASG ATLNGISAVW PHVTRGIGQI WSAVRIGTDP SSTS
101: ETFALGLASG ATLNGISAVW PHVTRGIGQI WSAVRIGTDP SSTS
Arabidopsis Description
At1g16790 [Source:UniProtKB/TrEMBL;Acc:Q6NQG3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.