Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35117 | Canola | cytosol | 85.42 | 81.46 |
| Bra026026.1-P | Field mustard | cytosol | 84.72 | 80.79 |
| CDY40034 | Canola | cytosol | 84.03 | 80.13 |
| KRH43091 | Soybean | cytosol, nucleus, plastid | 48.61 | 50.36 |
| KRH59237 | Soybean | cytosol | 48.61 | 50.36 |
| VIT_09s0054g00710.t01 | Wine grape | cytosol, plastid | 45.14 | 48.51 |
| GSMUA_Achr5P21980_001 | Banana | nucleus | 39.58 | 39.58 |
| PGSC0003DMT400011859 | Potato | nucleus | 40.97 | 37.82 |
| Solyc12g099960.1.1 | Tomato | cytosol | 40.97 | 37.82 |
Protein Annotations
| MapMan:35.2 | EntrezGene:838250 | ProteinID:AEE29497.1 | EMBL:AK175175 | ArrayExpress:AT1G16790 | EnsemblPlantsGene:AT1G16790 |
| RefSeq:AT1G16790 | TAIR:AT1G16790 | RefSeq:AT1G16790-TAIR-G | EnsemblPlants:AT1G16790.1 | TAIR:AT1G16790.1 | EMBL:BT010493 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009941 | GO:GO:0016020 |
| RefSeq:NP_173123.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | UniProt:Q6NQG3 | UniParc:UPI0000162DB6 | SEG:seg | : |
Description
At1g16790 [Source:UniProtKB/TrEMBL;Acc:Q6NQG3]
Coordinates
chr1:+:5744335..5745259
Molecular Weight (calculated)
15455.4 Da
IEP (calculated)
10.243
GRAVY (calculated)
-0.410
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQPATPNAA EETKSEQKQK SKKFPTPTEL ISHYQKRGLE PAEASIKVIE DLQNALVRVV SSSRNASSKD KLVTDARKID AINGRLAVVD AKLETKPGYV
101: ETFALGLASG ATLNGISAVW PHVTRGIGQI WSAVRIGTDP SSTS
101: ETFALGLASG ATLNGISAVW PHVTRGIGQI WSAVRIGTDP SSTS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.