Factsheet for Solyc07g032110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035686	Potato	cytosol	96.49	96.49
Zm00001d024355_P001	Maize	cytosol	11.62	82.69
Solyc01g110300.2.1	Tomato	nucleus	74.59	75.0
VIT_18s0001g13530.t01	Wine grape	cytosol	72.43	72.83
GSMUA_Achr11P...	Banana	cytosol	71.89	71.7
GSMUA_Achr5P19940_001	Banana	cytosol	71.35	71.16
GSMUA_Achr8P11720_001	Banana	cytosol	68.38	68.19
Os10t0512700-01	Rice	plasma membrane	68.11	68.11
EER91379	Sorghum	cytosol	67.57	67.75
TraesCS1A01G177700.1	Wheat	cytosol	67.3	67.48
TraesCS1B01G202500.1	Wheat	cytosol	67.03	67.21
GSMUA_Achr11P...	Banana	cytosol	67.57	67.02
TraesCS1D01G176200.1	Wheat	cytosol	66.76	66.94
Zm00001d013860_P012	Maize	cytosol	67.3	66.4
TraesCS2A01G388400.1	Wheat	cytosol	65.14	65.14
TraesCS2B01G406500.2	Wheat	cytosol	65.14	65.14
TraesCS2D01G386200.1	Wheat	cytosol	64.86	64.86
OQU82036	Sorghum	cytosol	64.05	64.4
Zm00001d032465_P002	Maize	cytosol	67.57	63.94
Zm00001d002810_P001	Maize	plasma membrane	63.24	63.59
Os04t0539800-01	Rice	plasma membrane	62.43	62.6
HORVU1Hr1G047180.11	Barley	cytosol	61.89	61.56
Zm00001d025955_P001	Maize	cytosol, mitochondrion	62.16	60.69
HORVU2Hr1G092430.1	Barley	cytosol	65.14	58.21
Solyc02g071330.2.1	Tomato	cytosol	45.14	52.68
Solyc08g074780.2.1	Tomato	cytosol	47.57	48.62

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:22.5.4.1.4	InterPro:AH/BAR_dom_sf	InterPro:BAR_dom	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	InterPro:IPR001452	InterPro:IPR004148	InterPro:IPR027267	UniProt:K4CDF5	PFAM:PF03114
PFAM:PF14604	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF4	InterPro:SH3-like_dom_sf	InterPro:SH3_domain
SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	EnsemblPlantsGene:Solyc07g032110.2	EnsemblPlants:Solyc07g032110.2.1	UniParc:UPI000276B022
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:35520876..35525182

Molecular Weight (calculated)

41283.8 Da

IEP (calculated)

6.648

GRAVY (calculated)

-0.610

Length

370 amino acids

Sequence
(BLAST)

001: MESIRKQATK LREQVAKQQQ AVFKQFSSGL GGPDNSVTDE VELQQHQKLE KLYISTRAGK HFQRDIIRGV EGYIITASKQ IEIGTRLSED SRKYGAENKC
101: TSGSTLSKAA LSYSRAQGEI EKEREDLLKA LGTQVAEPLR AMVVGAPLED ARHLAQRYDR VRQEAEAQAI EVSRRQAKVR ESNGNPESVS KMEAAEAKLK
201: DLKSNVATLG KEASTSMAAV EAQQQRLTLQ RLIAMVEAQR HYHERVLQIL DQLEAEMMSE RQRIEASPSS ATDNTMPPPP SYTDVNGGLH FKSYDGSIDG
301: TTYYLAEVVH PYEAESDVEL TLLIGDYVVV RKVSNNGWAE GECKGKGGWF PFGYVERRER ILATKVAEVF

Best Arabidopsis Sequence Match ( AT4G34660.1 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.