Factsheet for Zm00001d013860_P012

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002810_P001
Zm00001d009530_P001
Zm00001d011984_P001
Zm00001d013860_P012
Zm00001d024355_P001
Zm00001d025955_P001
Zm00001d028417_P001
Zm00001d032465_P002
Zm00001d038979_P001
Zm00001d042303_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34660.1	Zm00001d028417_P001	AT2G31260.1	24249832
AT4G34660.1	Zm00001d011984_P001	AT3G61710.1	24249832
AT4G34660.1	Zm00001d042303_P001	AT3G61710.1	24249832
AT4G34660.1	Zm00001d002810_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d013860_P012	AT4G34660.1	24249832
AT4G34660.1	Zm00001d024355_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d025955_P001	AT4G34660.1	24249832
AT4G34660.1	Zm00001d032465_P002	AT4G34660.1	24249832
AT4G34660.1	Zm00001d009530_P001	AT5G11550.1	21798944
AT4G34660.1	Zm00001d038979_P001	AT5G11550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91379	Sorghum	cytosol	95.47	97.02
Zm00001d024355_P001	Maize	cytosol	13.07	94.23
Os10t0512700-01	Rice	plasma membrane	91.2	92.43
TraesCS1B01G202500.1	Wheat	cytosol	89.87	91.33
TraesCS1D01G176200.1	Wheat	cytosol	89.6	91.06
TraesCS1A01G177700.1	Wheat	cytosol	89.6	91.06
Zm00001d032465_P002	Maize	cytosol	92.8	89.0
HORVU1Hr1G047180.11	Barley	cytosol	82.13	82.8
GSMUA_Achr5P19940_001	Banana	cytosol	78.67	79.51
Zm00001d042379_P001	Maize	peroxisome	23.73	78.76
GSMUA_Achr11P...	Banana	cytosol	77.33	78.17
GSMUA_Achr8P11720_001	Banana	cytosol	75.73	76.55
VIT_03s0038g00460.t01	Wine grape	cytosol	75.47	76.28
KRH51472	Soybean	cytosol	74.13	74.93
Solyc01g110300.2.1	Tomato	nucleus	73.33	74.73
PGSC0003DMT400008049	Potato	mitochondrion	73.33	74.32
VIT_18s0001g13530.t01	Wine grape	cytosol	72.0	73.37
KRH29359	Soybean	endoplasmic reticulum	72.0	72.78
KRH24385	Soybean	endoplasmic reticulum	70.93	71.7
Zm00001d002810_P001	Maize	plasma membrane	69.33	70.65
AT4G34660.1	Thale cress	mitochondrion	68.53	69.84
CDX75452	Canola	mitochondrion	67.47	68.56
Bra011550.1-P	Field mustard	mitochondrion	67.47	68.56
CDX69077	Canola	mitochondrion	67.2	68.29
CDY17473	Canola	mitochondrion	66.93	68.21
CDX76295	Canola	cytosol	65.87	67.3
Solyc07g032110.2.1	Tomato	cytosol	66.4	67.3
PGSC0003DMT400035686	Potato	cytosol	66.4	67.3
KRH60785	Soybean	endoplasmic reticulum	69.6	67.27
Zm00001d025955_P001	Maize	cytosol, mitochondrion	67.2	66.49
Bra034642.1-P	Field mustard	cytosol	62.4	66.48
Bra010715.1-P	Field mustard	cytosol	65.87	66.22
CDY12114	Canola	cytosol	20.53	64.71
CDX90304	Canola	cytosol	65.6	58.29
CDY12115	Canola	cytosol	64.8	57.45
Zm00001d006152_P001	Maize	nucleus	19.47	49.32
Zm00001d006461_P001	Maize	mitochondrion	45.6	49.14
Zm00001d008747_P001	Maize	nucleus	21.33	47.34
Zm00001d028558_P003	Maize	cytosol	41.6	39.49
Zm00001d022556_P001	Maize	cytosol	31.47	31.64
Zm00001d022555_P001	Maize	cytosol, mitochondrion	34.4	31.62

Protein Annotations

Gene3D:1.20.1270.60	EntrezGene:100272839	Gene3D:2.30.30.40	MapMan:22.5.4.1.4	UniProt:A0A1D6GMZ7	InterPro:AH/BAR_dom_sf
ProteinID:AQK64640.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452
InterPro:IPR027267	PFAM:PF14604	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF4	InterPro:SH3-like_dom_sf
InterPro:SH3_domain	SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	UniParc:UPI0008437ACC	EnsemblPlantsGene:Zm00001d013860
EnsemblPlants:Zm00001d013860_P012	EnsemblPlants:Zm00001d013860_T012	SEG:seg	:	:	:

Description

SH3 domain-containing protein 2

Coordinates

chr5:+:23137016..23154188

Molecular Weight (calculated)

41928.2 Da

IEP (calculated)

7.496

GRAVY (calculated)

-0.471

Length

375 amino acids

Sequence
(BLAST)

001: MEAIRKQASK FREQVARQQQ AVMKQFGGGY GADGVFANEA EAQQHSKLEK LYISTRAAKH FQRDIVRGVE GYIVTGSKQV EIGNKLCEDG KKYGTENTCS
101: SGSTLSKAAL SFAKARSMME KERGNLLKAL GTQVAEPLRA MVMGAPLEDA RHLAQRYDRM RQEAEAQVIS LFLQAIEVSK RQMKLREASG NSDMVSRLEA
201: AESKLQELKS NMGVLGKEAV AAMTAVEAQQ QRLTLQRLIA LVESERNYHQ KVLQILDQLE REMVSERQRI EGAPPVVESS MPPPPAYEEV NGIFMRNTVA
301: ELVETVEYFL AEAIQSYQAE SDTELNLSTG DYIVVRKVSN NGWAEGECRG KAGWFPYDYI EKRERVLASK VAQVF

Best Arabidopsis Sequence Match ( AT4G34660.1 )
(BLAST)

001: MDAIRKQASR LREQVARQQQ AVFKQFGGGG YGSGLADEAE LNQHQKLEKL YISTRAAKHY QRDIVRGVEG YIVTGSKQVE IGTKLSEDSR KYGSENTCTN
101: GNVLTRAALN YGRARAQMEK ERGNMLKALG TQVAEPLRAM VLGAPLEDAR HLAQRYDRMR QEAEAQATEV ARRQAKARES QGNPDILMKL ESAEAKLHDL
201: KSNMTILGKE AASALASVED QQQKLTLERL LSMVESERAY HQRVLQILDQ LEGEMVSERQ RIEAPSTPSS ADSMPPPPSY EEANGVFASQ MHDTSTDSMG
301: YFLGEVLFPY HGVTDVELSL STGEYVVVRK VTGSGWAEGE CKGKAGWFPY GYIERRERVL ASKVSEVF

Arabidopsis Description

SH3P2SH3 domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VWF1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.