Factsheet for Zm00001d006152_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008747_P001	Maize	nucleus	99.32	86.98
HORVU2Hr1G047840.1	Barley	cytosol	47.97	48.63
Zm00001d006461_P001	Maize	mitochondrion	98.65	41.95
EER99434	Sorghum	cytosol	94.59	40.23
Os07t0508300-01	Rice	plasma membrane	90.54	38.51
Zm00001d022556_P001	Maize	cytosol	93.92	37.27
Zm00001d022555_P001	Maize	cytosol, mitochondrion	100.0	36.27
TraesCS2D01G231700.1	Wheat	cytosol	83.78	35.94
TraesCS2A01G226200.1	Wheat	cytosol	82.43	35.36
TraesCS2B01G249500.1	Wheat	cytosol	81.76	35.07
Zm00001d024355_P001	Maize	cytosol	12.16	34.62
GSMUA_Achr9P02630_001	Banana	mitochondrion	71.62	33.76
Solyc02g071330.2.1	Tomato	cytosol	64.86	30.28
VIT_10s0003g02590.t01	Wine grape	cytosol	66.89	28.45
AT4G18060.1	Thale cress	cytosol, mitochondrion	65.54	27.64
KRH59070	Soybean	cytosol	66.22	27.53
KRH42945	Soybean	endoplasmic reticulum	64.19	27.3
Bra012620.1-P	Field mustard	mitochondrion	64.19	27.07
CDX90424	Canola	mitochondrion	64.19	27.07
CDY01515	Canola	cytosol, mitochondrion	63.51	26.78
PGSC0003DMT400007954	Potato	cytosol	63.51	26.63
Zm00001d013860_P012	Maize	cytosol	49.32	19.47
Zm00001d002810_P001	Maize	plasma membrane	47.97	19.29
Zm00001d032465_P002	Maize	cytosol	49.32	18.67
Zm00001d025955_P001	Maize	cytosol, mitochondrion	45.95	17.94
GSMUA_Achr6P29510_001	Banana	cytosol	57.43	16.57
Zm00001d028558_P003	Maize	cytosol	38.51	14.43
Zm00001d042379_P001	Maize	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d006152_P001	EnsemblPlants:Zm00001d006152_T001	EnsemblPlantsGene:Zm00001d006152	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:SH3-like_dom_sf	PANTHER:PTHR44109	PANTHER:PTHR44109:SF5	ProteinID:ONM22914.1	SEG:seg	SUPFAM:SSF50044
UniParc:UPI000845208E	UniProt:A0A1D6ET80	MapMan:35.1	:	:	:

Description

SH3 domain-containing protein 3

Coordinates

chr2:+:199865890..199868263

Molecular Weight (calculated)

16506.9 Da

IEP (calculated)

10.331

GRAVY (calculated)

-0.469

Length

148 amino acids

Sequence
(BLAST)

001: MAIGGPLEDA RGLAQRYSRM RHEAEILSTE IARRKARVRE APIAEHTTKL QQSEARMIEH KASMAVLGKE AAAALAAVES QQQRVTLQRL VGAMSSEKQR
101: RESAPPIISS HKRAEKAQYF LAEVMHNFNG TTEKELSLIV GDYVVVRQ

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.