Factsheet for Solyc02g071330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007954	Potato	cytosol	97.16	87.25
KRH42945	Soybean	endoplasmic reticulum	73.82	67.24
AT4G18060.1	Thale cress	cytosol, mitochondrion	73.5	66.38
VIT_10s0003g02590.t01	Wine grape	cytosol	71.92	65.52
KRH59070	Soybean	cytosol	73.19	65.17
CDY01515	Canola	cytosol, mitochondrion	71.92	64.96
Zm00001d006152_P001	Maize	nucleus	30.28	64.86
Zm00001d008747_P001	Maize	nucleus	34.38	64.5
Bra012620.1-P	Field mustard	mitochondrion	71.29	64.39
CDX90424	Canola	mitochondrion	71.29	64.39
GSMUA_Achr9P02630_001	Banana	mitochondrion	55.2	55.73
Os07t0508300-01	Rice	plasma membrane	59.31	54.02
EER99434	Sorghum	cytosol	59.31	54.02
Zm00001d006461_P001	Maize	mitochondrion	58.68	53.45
TraesCS2D01G231700.1	Wheat	cytosol	56.78	52.17
TraesCS2A01G226200.1	Wheat	cytosol	56.15	51.59
TraesCS2B01G249500.1	Wheat	cytosol	55.84	51.3
HORVU2Hr1G047840.1	Barley	cytosol	22.4	48.63
Solyc07g032110.2.1	Tomato	cytosol	52.68	45.14
Solyc01g110300.2.1	Tomato	nucleus	52.37	45.11
Zm00001d022555_P001	Maize	cytosol, mitochondrion	52.05	40.44
Zm00001d022556_P001	Maize	cytosol	46.37	39.41
Solyc08g074780.2.1	Tomato	cytosol	42.9	37.57
GSMUA_Achr6P29510_001	Banana	cytosol	56.78	35.09

Protein Annotations

Gene3D:1.20.1270.60	Gene3D:2.30.30.40	MapMan:35.1	InterPro:AH/BAR_dom_sf	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001452	InterPro:IPR027267	UniProt:K4B8A9	PFAM:PF14604
PRINTS:PR00499	PFscan:PS50002	PANTHER:PTHR44109	PANTHER:PTHR44109:SF5	InterPro:SH3-like_dom_sf	InterPro:SH3_domain
SMART:SM00326	SUPFAM:SSF103657	SUPFAM:SSF50044	EnsemblPlantsGene:Solyc02g071330.2	EnsemblPlants:Solyc02g071330.2.1	UniParc:UPI0002768C0D
SEG:seg	:	:	:	:	:

Description

SH3 domain-containing protein 3 [Source:Projected from Arabidopsis thaliana (AT4G18060) UniProtKB/Swiss-Prot;Acc:Q8L7W0]

Coordinates

chr2:+:40813446..40818687

Molecular Weight (calculated)

35672.4 Da

IEP (calculated)

5.928

GRAVY (calculated)

-0.551

Length

317 amino acids

Sequence
(BLAST)

001: MVIDEMEMQL HHQLDKLYKS TREKRDFQKE IVKAAETFTA IGYKHIEPGT KLSEDCCKYG VENPNDEVLA KAASIYGDAR KHAEKEVEDL NKLFFSQVLE
101: PLRAMVAGSP LEDARHLAQR YSKMRQEAEI QATEVSRRQA RVREAPIPEN VAKLHSAETK MQELKANMTV LGKEAAAALA AVESQQERLT FQRLVAMVEA
201: EKLYHERVAV ILGNIEAEIV SEKQRKEAAP PVATLPVNPP AQIPEKTKYF LAEAIHSFEA ESEKELSLSV GDYVVVRKVT QSGWSEGECQ GRAGWFPSEY
301: VEKRQRVPTS NGATEAY

Best Arabidopsis Sequence Match ( AT4G18060.1 )
(BLAST)

001: MDAFRRQASK LRDQVAKQQL AVIKQFSGTG YESSDVMVID ELEMQRHHQL DKLYRSTRSA KEFQRDIVKA AEAFTTIGLR HIEAGTKLSE DCCRYGNENS
101: QNIDENILAK AAAIYGDARK HVDKEQEDFN KLLASQVLDP LRAMVAGSPL EDARHLAQRY SRMRQEAETH ATEVSRRQAR VREAPIPENV AKLQLAEAKM
201: QELKANMAVL GKEATAALAA VESQQHRLTF QRLVAMVEGE KNYHLRIAAI LSDIEAEMVT EKQHKESAPP AIPTENGSEK TSYFLAEVIH PFSAASEKEL
301: DLDKGDYIVV RKVSQTGWAE GECKGKAGWF PMAYIEKRQR LPTTNFAAEV Y

Arabidopsis Description

SH3P3SH3 domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7W0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.